Gene Ddes_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2302 
Symbol 
ID7286020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2769592 
End bp2770542 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID643583125 
Producthemolysin A 
Protein accessionYP_002480875 
Protein GI220905563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATAA AAAATACCTG CCTGCTGTGG GCATGCCGTC ATGCCACCTC CTTGGCGCAG 
CAGGCCCGGT CCCTGTCTGC ACACGTTGAG CGCACCGCAT ATCGCATTGC CAGCCGCCGC
CTTCGGCGCT ATATAGCCCG CATGGCAAAA AACTCACGTC AACGCGCAGA CCAGCTTGTT
TTTGAACAGG GCCTTGCGGA CAGCCGCGAG CAGGCCCGCC GCCTCATCAT GGCTGGCAAG
ATAGCCCTTG CCGCCGGTGT ACCCGGTGCG CCGCCACAGC TTGTTCCCAA ACCGGGGCAT
CCGTATCCGG CTGACACGGC CTTTGCCCTG CTGCAGCCGG AACCCTACGT CAGCCGCGGG
GCATACAAGC TGCTGACCAT CCTCGACCAG TTCAAGCTGG ACGTGACCGG CCTTGTGTGC
CTGGATGCCG GAGCCTCCAC GGGCGGCTTC ACGGACTGCC TGCTGCAAAG GGGCGCGGCC
CGCGTTTACG CTGTGGACGT GGGGCGCAAC CAGCTGCATG AAAAACTGCG GACCAATGCC
CGCGTTATCA ATCTTGAAGG CGTGAACCTG CGCCACGCCG AGGCCGGGCT TATCCCCGAA
CCGGTGGACA TGGTGGTAGC CGACGTTTCC TTTATATCGC TCACTCTCGT GCTTCCCGCC
TGCATGACCT GGCTCAGGCC CGGGGGCCTT GTGGCCACGC TTATCAAACC ACAGTTTGAA
CTGGGACCGG GCGAAACAGT CAAGGGCGTG GTGCGGGACG AAGAAGCACG GCAACGAGCC
GTGGACAAGA TACTCGCATT CGGCCGGGCC AGCCTGGGCC TGAGCTGCCG TGGCGTACTG
CCTGCGGCCA TCAAGGGTCC CAAGGGCAAT CAGGAGTACA TGGCACTTTT CGAACGCGGC
AACACGGTTG TGGAAAACGA CACAGCCCGG AACCGGGCCT TTACCCCTTG A
 
Protein sequence
MSIKNTCLLW ACRHATSLAQ QARSLSAHVE RTAYRIASRR LRRYIARMAK NSRQRADQLV 
FEQGLADSRE QARRLIMAGK IALAAGVPGA PPQLVPKPGH PYPADTAFAL LQPEPYVSRG
AYKLLTILDQ FKLDVTGLVC LDAGASTGGF TDCLLQRGAA RVYAVDVGRN QLHEKLRTNA
RVINLEGVNL RHAEAGLIPE PVDMVVADVS FISLTLVLPA CMTWLRPGGL VATLIKPQFE
LGPGETVKGV VRDEEARQRA VDKILAFGRA SLGLSCRGVL PAAIKGPKGN QEYMALFERG
NTVVENDTAR NRAFTP