Gene Ddes_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2299 
SymbolprfA 
ID7286017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2766784 
End bp2767854 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID643583122 
Productpeptide chain release factor 1 
Protein accessionYP_002480872 
Protein GI220905560 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCCA AATTGGAAGG CCTGGAAAAG AAATATCTGG AGCTTGAAGA GGCCCTTGCC 
CAGCCTGATG TTTTCAACGA TCAGGATCAG TACCGCAAGC TGACCAAAGC CCACGCCGAC 
CTGAGCGACG TGGTGGAGCT TTTTCGCCGT CACCGCGCGG TGAGCGAAGA GCTGGCCGAA 
AACAGGCTGC TGCTGCACGA TGAAGACCCC GAAATCCGTG CCATGGCGCA GGAAGAAGTG 
CACCGGGGCG AGGCCGAACT GCCAAATCTT GAGCATGAAC TCAAGGTAAT GCTGCTGCCC 
AGCGACCCCC TGGACGAAAA AAATACCATT CTTGAAATCC GCGCGGGTAC GGGCGGCGAA 
GAGGCTGCCC TGTTTGCAGC GGATCTTTTC CGCATGTATA CGCGCTATGC CGAGCTTAAA 
AACTGGAAGG TGGAGATCAT GAGTGAATCC CCTTCCGAAA ACGGCGGCTA TAAGGAAATC 
ATCTGCCTTA TCGCCGGCGA CCGCGTGTAC AGCCACCTCA AGTTCGAGGC GGGAACACAC 
CGTGTGCAAC GCGTACCCGC TACCGAGGCG CAGGGCCGTA TTCACACCTC GGCCGCTACC 
GTGGCCGTTA TGCCCGAAGC TGAAGAGGTC GACGTTGAAA TCCGCCCCGA AGACCTGCGC 
ATAGATATTT ACCGGGCTTC GGGCGCGGGC GGACAGCACG TCAACAAGAC GGAATCGGCC 
GTGCGCATCA CCCACCTGCC CACCAATACC GTGGTTACCT GTCAGGATGA GCGCTCGCAG 
CATAAAAACA AGGCCCGCGC CATGAAGGTG CTTGCCTCGC GTATTCTGGC TGCCGAACGC 
GAGCGCCAGA GTTCGGAGCT TTCCGCAGAC CGCAAGGCAC AGGTCGGCTC CGGCGACCGT 
TCGGAGCGTA TCCGTACCTA TAACTTTCCG CAGGGCCGCT GCACGGACCA TCGCATCAAT 
CTGACACTGT ATTCCCTGGA CAGGATTATG GAAGGCGAGT TGGAATCGTT GGTGGAGGCT 
TTGGGCACAG CCGCCCAGGC CGAAGCCCTC AAGGCCCAGG CCTCCGAATA G
 
Protein sequence
MFAKLEGLEK KYLELEEALA QPDVFNDQDQ YRKLTKAHAD LSDVVELFRR HRAVSEELAE 
NRLLLHDEDP EIRAMAQEEV HRGEAELPNL EHELKVMLLP SDPLDEKNTI LEIRAGTGGE 
EAALFAADLF RMYTRYAELK NWKVEIMSES PSENGGYKEI ICLIAGDRVY SHLKFEAGTH 
RVQRVPATEA QGRIHTSAAT VAVMPEAEEV DVEIRPEDLR IDIYRASGAG GQHVNKTESA 
VRITHLPTNT VVTCQDERSQ HKNKARAMKV LASRILAAER ERQSSELSAD RKAQVGSGDR 
SERIRTYNFP QGRCTDHRIN LTLYSLDRIM EGELESLVEA LGTAAQAEAL KAQASE