Gene Ddes_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2279 
Symbol 
ID7285997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2743988 
End bp2744680 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID643583102 
Productbeta-lactamase domain protein 
Protein accessionYP_002480852 
Protein GI220905540 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA TAACCTGGTT TGGACACTCG GCCTTCAAGA TCAGCAACCA TGACGTGCAT 
GTGGTTATTG ACCCCTTTCT GGCTCCGCAA TACGGACTCG GCGTGGATGA TGTGGGCCGC
GCCGACCTAG TGCTTCTGAC CCACGACCAC GGCGACCATG TGGGCGAAGC CGTAACCATA
TGCCAAAAAA CCGGGGCCAT GCTCGGGGCC ATCGTAGGCA CGGCGCAAAA GGCTGCGGCC
GGCCTGCCCG ACAGTCAGAT ACTCAACGGC ATCGGCTTCA ACATGGGCGG CACCCTCGCC
TGCAAGGGCG CCAGCATTAC CATGACGCCG GCATTCCACA CCACTGATTC GGGCTGTCCG
GCGGGCTACA TCGTGCGTAT GCCCGACGGC CTCACCGTCT ACCATTCCGG CGACACATGC
GTTTTTGGCG ACATGGCCCT GTGGGGACAG ATCTACTCCA TCGATGTGGC CCTGTTGCCC
ATTGGCGGCG TTTTCACAAT GGACGCGCCG CAGGCGGCCC TGGCCTGCAA GCTGCTCAAC
TGCAAAAACG TGATCCCCAT GCACTGGGGA ACCTTTCCCG TTCTGGCGCA GGACACCCGG
GACTTTGAAA AGGAACTGGC AAAACTGGAT CTGCCCTGCT CCTGTGCGGT TATGGCTCCG
GGGCAGACAC GCGCCTTTTC TTCGTGCCGC TGA
 
Protein sequence
MSDITWFGHS AFKISNHDVH VVIDPFLAPQ YGLGVDDVGR ADLVLLTHDH GDHVGEAVTI 
CQKTGAMLGA IVGTAQKAAA GLPDSQILNG IGFNMGGTLA CKGASITMTP AFHTTDSGCP
AGYIVRMPDG LTVYHSGDTC VFGDMALWGQ IYSIDVALLP IGGVFTMDAP QAALACKLLN
CKNVIPMHWG TFPVLAQDTR DFEKELAKLD LPCSCAVMAP GQTRAFSSCR