| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2278 |
|---|
| Symbol | |
|---|
| ID | 7285996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2743146 |
|---|
| End bp | 2743802 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643583101 |
|---|
| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
|---|
| Protein accession | YP_002480851 |
|---|
| Protein GI | 220905539 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
|---|
| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCG CCATATCCCC AACCGCTGCG GCAGACCAGA CAGACAACCG CGCCGCCATG
CCCGCTCTTT CGCCCGGCAC CCGGCCGCGC GACATTCTGG TGGGCGTCAG CGGCGCCAGC
GGCATGCCGC TGGCGGCATG TCTGCTGCGC AGCCTGGCGG CCATGCCCCA TGTGCGTGTT
CACTGCATCA TTTCGCAAGG CGCGCATGCG GTCTTGCGCG CCGAGTGCGA ATCCGGCCCG
GAGCTACTCG CCCAGTACGC GCACCACGTT CACGACGCGG AAAACCTGGG GGCCGGGCCC
TCCAGCGGCT CATGGTGGCG GCGCGGTCCT GAGCCTGCGG CCATGATCCT TGCGCCGTGC
TCAATGGGTA CACTCGGGGC CATAGCCTCG GGAGCCACAC GCAACCTCGT GCAGCGTTCG
GCGGATGTGG CCCTCAAAGA GCGGCTGCCG CTGGTGCTGG TCCCGAGGGA AAGCCCGCTT
TCGGCCATTC ACCTGCGCAA CATGCTTGCC CTGCATGAAG CCGGAGCAGT TATCATGCCC
CTCTGCCCGG GCTTCTATCT TAAACCCCAA AGCGTGGATG ACCTGCTGCT GCACCTGTGC
GGCAGAATTT TCGACCAGCT AGGCCTGCCG CACAATCTGG GCCGATGGCC GGGCTAA
|
|---|
| Protein sequence | MTSAISPTAA ADQTDNRAAM PALSPGTRPR DILVGVSGAS GMPLAACLLR SLAAMPHVRV
HCIISQGAHA VLRAECESGP ELLAQYAHHV HDAENLGAGP SSGSWWRRGP EPAAMILAPC
SMGTLGAIAS GATRNLVQRS ADVALKERLP LVLVPRESPL SAIHLRNMLA LHEAGAVIMP
LCPGFYLKPQ SVDDLLLHLC GRIFDQLGLP HNLGRWPG
|
|---|
| |