Gene Ddes_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2274 
Symbol 
ID7285991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2738098 
End bp2739144 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID643583096 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002480847 
Protein GI220905535 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.126357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA AGCTGACTGT TGCCGTTGTT GGCGCCACTG GCGCCGTAGG CCGTGAAATG 
CTCAAGACCC TTCACGAGCG CGACTTTCCC GCCACCGAAA TCCGTGCCTT TGCTTCCGCC 
CGTTCGGCGG GAACCAAGGT TCCTTTCGGC GAAAAGGAAC TGACCGTTCA GGAACTTAAA 
GAAGACGTCT TTGAAGGCAT TGACCTGGCC ATTTTTTCCG CAGGCGGCGC CGCTTCGCTA 
AAATTTGCCC CCCATGCGGC CCATGCCGGC TGCGTCGTGG TGGACAACTC CTCCACATGG 
CGCATGGATG ACCGCTGCCC CCTGGTGGTG CCCGAAGTCA ACGCCCAGGC CCTGGAAGAC 
CATAACGGCA TCATCGCCAA TCCCAACTGT TCTACCATCC AGATGATGGT GGCGCTCAAG 
CCCCTGCACG ATGCAGCCAA AATCAGGCGC GTGGTTGTTT CCACCTATCA GGCGGTTTCG 
GGCACCGGGC AGAAGGGTAT TGAAGAGCTG GAGCGCCAGG TGCGCGACCT CTTCAACGGG 
CGCGATCCAG AAAACAAGAC CTACCCCTAC CGCATTGCCT TCAACTGCCT GCCCCACATC 
GACGTTTTCC TTGAAAATGA CTACACCAAG GAAGAAATGA AGATGGTCCA CGAAACCGTC 
AAGATTTTCA ACGATCCGTC GGTCAAGGTC ACGGCTACCT GCGTGCGCGT ACCCGTTTTT 
TACTGCCATG CCGAATCCGT CAACGTGGAA ACGGAAAAAA AGCTTTCGGC CAGAGATGCC 
CGCGTTATGC TTGCGCAGGC TCCGGGTGTG CGCGTGTTCG ACAATCCCCG CGAGCTTATG 
TATCCCATGC CCGGCTACTG CGTGGGCGAT GACCACACCT ATGTGGGCCG TATTCGTGAG 
GACGAAACCA TTGCAAACGG CCTCAACATG TGGATTGTGG CCGACAACGT GCGCAAGGGC 
GCGGCCCTCA ACACGGTGCA GATCGCCGAA GAGCTTGTGC AGCGCGGCCT TGTGCGCGTG 
ACGGACAAAA ACGTCTTTAT GTCCTGA
 
Protein sequence
MSKKLTVAVV GATGAVGREM LKTLHERDFP ATEIRAFASA RSAGTKVPFG EKELTVQELK 
EDVFEGIDLA IFSAGGAASL KFAPHAAHAG CVVVDNSSTW RMDDRCPLVV PEVNAQALED 
HNGIIANPNC STIQMMVALK PLHDAAKIRR VVVSTYQAVS GTGQKGIEEL ERQVRDLFNG 
RDPENKTYPY RIAFNCLPHI DVFLENDYTK EEMKMVHETV KIFNDPSVKV TATCVRVPVF 
YCHAESVNVE TEKKLSARDA RVMLAQAPGV RVFDNPRELM YPMPGYCVGD DHTYVGRIRE 
DETIANGLNM WIVADNVRKG AALNTVQIAE ELVQRGLVRV TDKNVFMS