Gene Ddes_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2271 
Symbol 
ID7285988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2733888 
End bp2735327 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content60% 
IMG OID643583093 
Producthistidine kinase 
Protein accessionYP_002480844 
Protein GI220905532 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCG ACCGCCATCT GCCCCAAAGC CTGTTTTCAC GGTTGAGCCT TTTTTTGCTC 
GGGGCTTTTT TTATCCTGCA CACCGTGACC ATCCTGACCG TGGCCGACTT TTTTGAACGC 
CATATGGTGC AGAATATGCT GGCGAACCAC AGCGCCACCA TAGCCCTGTG TGTCCGCATG 
TTTGAAGCGG AACCCGCGCA GAGCAGGCCT GCGCTCATGA GCGGTCTGGC GCGGTTTTCA 
GATGTGCGTG TGAAAATGCT GGATGAAAAA CCCGACATGC CGCAGGGAAC CGATACGCTT 
TCGCGCTTTT TTCTGGAGCA TATCCGTGAG GCGCTGGACG ATCTGGCCGC GCCCGGCCAG 
CAGCCGCGGG CCATGCAGGC TCAGGTGCGG GTGATCATAC TCGGCAAAGA GGCCGGGCAA 
TGGGCTTCGC TTTTTGAAAG ATTTTTTTCC TTGTGGGACG TGTCCGGCTC GTTCGACGCC 
CGCCTGACCA TAGAGCTTGC CGATGGTTCC TGGCTGGGCA TCAGTTACGA CGGCCCCGCC 
CACCGCGCCC ATCTTGAAGA CATGCCTTTC GTGGTGCTTG GCCTGGAATT CATTGTTTTT 
GCGGCCTTGC TGCTGCTCAT TGTGTACAGG CTGGTGCGCC CTCTGCGCAC CCTGGCGCGG 
GCCGCGGAAA AATTCGGCTC TTCACAACGC CTGCCCCACA TGGTCCCCGA CGAAGGCCCC 
AGTGAAGTGC GTCACGCGGC ACAGGCATTT AACGCCATGC AAAAGCGTAT CAGCGGCATC 
ATGGAAGAAC GGGAACGGGT TTTTGCAGCC CTGTCGCATG ACTTGCGCAC GCCGCTCACC 
CGCATGCGTT TGCGGCTTGA AAGCACGCCA CCCGGGACGT TCCGGCAGAA AATGCTTGAA 
GATGTGCAGA GCCTGCATTC CACCGTGGAA ATGGGTACGG CCATGACCCA GTGCCGCAGA 
CACACGGAGG ATCGCGTCAA GGTAGACATG CAGGCCTTTC TTGAGTCCAT TGTGGAGGAT 
CGCCGCGAAA TGGGGCAGGA TGTAACGCTG GCCGGTCCGG AGCTTGAGCT GCTGGCCCTT 
GTCTATCCCG TGGCCCTGCG GCGCTGCCTG GACAATCTGC TGGATAATGC CCTGCGCTAT 
GGGCGGGAGG CTGTTCTTTC CGCTTCAGTG CAGACGCTGC CCGGCAGAAA AAGCGTGCTG 
CGCGTGGATA TTGACGACAA GGGGCCGGGC ATGGACCCGG CCTTGCTCGA AAAGGTTTTT 
GAACCGTTTT TTCGTGTGGA AGGTTCGCGT AACAGGCATA CGGGCGGTCA TGGCCTTGGG 
CTTTCCATTG CCCGCAGCAT GGCGGGCCTG CATGAGGCCG CGCTGTTTCT TGAAAATCTG 
CCCCAGGGCG GTCTCAGGGC GCGGCTGGAG TTGCCGCTGA TGGATGAACG CCGCGCCTGA
 
Protein sequence
MNTDRHLPQS LFSRLSLFLL GAFFILHTVT ILTVADFFER HMVQNMLANH SATIALCVRM 
FEAEPAQSRP ALMSGLARFS DVRVKMLDEK PDMPQGTDTL SRFFLEHIRE ALDDLAAPGQ 
QPRAMQAQVR VIILGKEAGQ WASLFERFFS LWDVSGSFDA RLTIELADGS WLGISYDGPA 
HRAHLEDMPF VVLGLEFIVF AALLLLIVYR LVRPLRTLAR AAEKFGSSQR LPHMVPDEGP 
SEVRHAAQAF NAMQKRISGI MEERERVFAA LSHDLRTPLT RMRLRLESTP PGTFRQKMLE 
DVQSLHSTVE MGTAMTQCRR HTEDRVKVDM QAFLESIVED RREMGQDVTL AGPELELLAL 
VYPVALRRCL DNLLDNALRY GREAVLSASV QTLPGRKSVL RVDIDDKGPG MDPALLEKVF 
EPFFRVEGSR NRHTGGHGLG LSIARSMAGL HEAALFLENL PQGGLRARLE LPLMDERRA