Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2261 |
Symbol | |
ID | 7285978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 2719436 |
End bp | 2720728 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643583083 |
Product | diguanylate cyclase |
Protein accession | YP_002480834 |
Protein GI | 220905522 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00439148 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCGC GCGATGTATC CCTTGTCTGC GGGAATCGTC TGGATTTCTT GCAGGGCCTG CCGCAGGCTC TTGCGGTTAT GCGGGTAGAC CTGGATGTTA TGGGCAGGCC GCGTGATTTG ATGGTTGTTT ATGGCAATGA AGCGCTTTTT ACACTTTTTG GTGCTCCCCG TGAATGGATG ACGGGCGTTT CGCTTGTTGA CTCCTGTATG AAGCTGGACA GAAAATGGCT GGAAATTTTC CGGAAGACTG CCTATCAGGG GCAAGTGCAG GAAATGACCG GTTTCTGGCC TTCGTTGGGC AGACACCTCG CTGTAACCTG CCATCAGCCA CAATACGGCT ACTGTACCTG TCTTTTTCAG GATGTGACCG AGCGCGTACA TAAAGAAAAT GATCTGGTAA AAAGCCGTAA CCGTCTTGAA GCCCTGCTGC ACAGCACTGT TGATATGGTG TTTCAGATTG ATCCGGTTAC GGGGGGCATC AGCAATCTTG ACCAGGAGCT GGCTGCCTGC GGCGGCCTGC TCAAAGCCAG AAGAGTTCCG GAAACCCTTC TGATGCAAGG GCTTCTGGCT CCCGGCCAGA ACGATAAAAT CAGCAGCTTG ATCAACCTTG CCCTGCGCGC TGAAAATGAC TGTACCTGCG AGGTGCGCGC ACGGCTCAAG GCCGGTTCTC CCTATACCTG GCACAGTCTC ACCGTTGTGG GCTACAGCGA TCCGTGTTCT AAAGAAATCG GTATAATAGG CTTTCTTAAA GACGTGCATG CCAGCATCAA GGAAAGGGAC GCCCTGGTGC GCCGGGCAGA AAAAGATCCT CTTTGCGGCA TCTATAACAG GGCTGCCGGC GAAAACCTCG CTGCTTCCAG GCTGAGCGGA GCGGACGAAA CCTGTCACAG CGCGGCCCTG CTTGTTTTTG ATCTGGATAA TTTCAAGGTA ATTAACGACA CGGCCGGGCA TGCGGCGGGC GATGCGGTGC TGAAAGCTTT TGCCGTTCTG CTGGGCCAGT GCTTTCGTAA AGACGATATT GTTTTTCGGT TTGGCGGGGA TGAGTTTGCC GTTTTTGTGC AGAACATGCC GCAGGAAAGG ATCATCCGTG TCAGTAAAAA TATCGTGGCA AGGCTGGAAG AACCGCTTGT TGACGATGTG CGCGTGGGTG CGTGTATTGG GGTTGCCTAC AGCCGGTCGG GCCGCCACAG CTATGAAGAA CTTTATAAAA TGGCCGATAA GGCTTTGTAC AATGCCAAAG AAGGCGGCAA GGGACAAACC GCGATTCTTT GTCTGCATGG CAGCGGGGCC TGA
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Protein sequence | MPPRDVSLVC GNRLDFLQGL PQALAVMRVD LDVMGRPRDL MVVYGNEALF TLFGAPREWM TGVSLVDSCM KLDRKWLEIF RKTAYQGQVQ EMTGFWPSLG RHLAVTCHQP QYGYCTCLFQ DVTERVHKEN DLVKSRNRLE ALLHSTVDMV FQIDPVTGGI SNLDQELAAC GGLLKARRVP ETLLMQGLLA PGQNDKISSL INLALRAEND CTCEVRARLK AGSPYTWHSL TVVGYSDPCS KEIGIIGFLK DVHASIKERD ALVRRAEKDP LCGIYNRAAG ENLAASRLSG ADETCHSAAL LVFDLDNFKV INDTAGHAAG DAVLKAFAVL LGQCFRKDDI VFRFGGDEFA VFVQNMPQER IIRVSKNIVA RLEEPLVDDV RVGACIGVAY SRSGRHSYEE LYKMADKALY NAKEGGKGQT AILCLHGSGA
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