Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2257 |
Symbol | |
ID | 7285974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2716454 |
End bp | 2717095 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643583079 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_002480830 |
Protein GI | 220905518 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.320604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACC AACCCAAAAG CAAACACATT CCCCGCGCCA CCATCCAGCG CCTCGCCACG TACGTACAGG TGCTGGAGAA CTTCTCCCGC GACAATGTGG AGGTCATTTC CTCCAACCCC CTGGCCGAGG CCTGCGGGGT CAACGGTTCG CAGGTGCGCA AAGACCTTGC CTACTTTGGC GAGTTCGGCA TTCGCGGGGT GGGCTACCAT GTAAAATCCC TGATTGCCGC CATCACCTCT TCGCTTGGTG TTGACCGCGA ATGGCGTATG GCCCTGATCG GTGTCGGCAA CCTCGGCAAG GCCATCCTTA ACCATGGTGA ATTCCGCGCT CGCGGCTTCA ATATCGTGGC CATATTTGAC TGCGACCCCT TCAAGATCGG TGAAATTGTC CACGGCCTTG AAGTGCATTG CACCCGCGAT CTCAAGGATA TGGTGTCTGA CCTGAATATT GAAATCGGCA TCATCACCAC CCCGCCTGAA AGGGCGCAGC GGGCTGCCCA GCACCTTATG GACGCGGGCA TTACCTCCAT ACTGAACTTC GCGCCCGCGC GCATCAAGGT TCCTGAGCGT ATCAATGTGG AATACGTTGA CTTTTTCCAC CACCTTTATG CTCTGGCCTT CAACCACCCC ATGACCCGCT AG
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Protein sequence | MANQPKSKHI PRATIQRLAT YVQVLENFSR DNVEVISSNP LAEACGVNGS QVRKDLAYFG EFGIRGVGYH VKSLIAAITS SLGVDREWRM ALIGVGNLGK AILNHGEFRA RGFNIVAIFD CDPFKIGEIV HGLEVHCTRD LKDMVSDLNI EIGIITTPPE RAQRAAQHLM DAGITSILNF APARIKVPER INVEYVDFFH HLYALAFNHP MTR
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