Gene Ddes_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2236 
Symbol 
ID7285952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2696622 
End bp2697644 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content46% 
IMG OID643583058 
Productintegrase family protein 
Protein accessionYP_002480810 
Protein GI220905498 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0483412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTA ACCAAACCAA GTCTGGCAGA TGGTACGTTC AGTACCGAGT GCCGGGGCTT 
TCTAGCCCTA AAAAGGATTA TTTGGGGAAT AATCCAGATG CACAAGAGCA GGCTTTGAAA
CGACAAGCAG AAATAGCGAC TGGACATATA TACACGGTGG CTGCACTTTC GAATTTTCGG
CAGATATACC TTGACGATTT AGGACAATGC TACCTTGATT TTCTCAAAAT CAAGGACAAG
ACAACTTCTT GGATTGGCAC TCTCAAGTAT TTATTAAATG AACATTTTCT TCCGGTGCTT
TGCCATTCTC CTGTTGACCA GATATCCTTC ACGGATATTT TAAAAGTGGC GGCGAGGTTC
GCAGATAAGT CCGCCGCCAC CCAAAATCGT TATATGGATA GCCTACATGT AATATTCCGG
TTTGGCATAC GCCATGAACT GACCACCAAT GACCCTATGG CTCATTGGCA AAAGAAACGT
GAGCCGCAGC GTAACATGTT ATTGACGATC AAAGACCTTG CAAAAATCTA TGCAGCAGCT
CCCGACCATT TGAAATGGAT TATTGAAGTT GAATGGGCCT TGGGTACTCG CCCTGGGAAG
TCAGAATTAT TTTCTCTATG CTGGCAAGAT GTTGATTTTG ACAACAATTT CATTCGAGTT
AGAGGGACCA AGACAAAAGG GTCAGACCGG ATCATTCCGC TCACACCTGA ATTTAAAGCC
CGCCTTCTGG ACAAGCGCGA TGTGGCCCAA AGTCCGTACA TTATTGAAGT TAATGGACGA
GGAATCCAGC ATTGTCGGAG GGCATTCAAA ACCGCCCTTG AAAAAGCCAA GATTGACTAC
CCCGTAAGGC TCTATGACAT CCGACACCTT TTCGCTTCAA CAATGCTTGC TAATGGCGGC
GACCTCAAGG CCGTTTCCAA ACTCCTTGGG CATAGCTCCA CCAGAATGAC GGCAGATACC
TATTACCATG AACTCCAAGG AGAAAAGGAA AGGGCCTTGA GTGCCAAGCC TCAGCTATTT
TAG
 
Protein sequence
MAVNQTKSGR WYVQYRVPGL SSPKKDYLGN NPDAQEQALK RQAEIATGHI YTVAALSNFR 
QIYLDDLGQC YLDFLKIKDK TTSWIGTLKY LLNEHFLPVL CHSPVDQISF TDILKVAARF
ADKSAATQNR YMDSLHVIFR FGIRHELTTN DPMAHWQKKR EPQRNMLLTI KDLAKIYAAA
PDHLKWIIEV EWALGTRPGK SELFSLCWQD VDFDNNFIRV RGTKTKGSDR IIPLTPEFKA
RLLDKRDVAQ SPYIIEVNGR GIQHCRRAFK TALEKAKIDY PVRLYDIRHL FASTMLANGG
DLKAVSKLLG HSSTRMTADT YYHELQGEKE RALSAKPQLF