Gene Ddes_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2212 
Symbol 
ID7285928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2667594 
End bp2668781 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID643583034 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002480786 
Protein GI220905474 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATCA AGGTCAATTT CAGCGGACGT GCCATCAGGT ACACCGAAGA AGAAATAGCC 
GTGGTTGTCG AGGCCATGCG CAACGCCGAT CCCCTTACCC AGGGGCATCA CATGCGCCGG
TTTGAGAGCA GGTTCGCAGA GTACCAGGGG GTGCCGCAGG GAACCTGCTT TACCACCATG
AACGGCTGCT CCGCCCTGGA ACTTTCAGCG CAGCTCTGCC TGTTCAATGA AGGCGACGAG
GTGGTCATTC CCTCCCATAC CTTCACGGCC TCGGCCTATC CCTACATCAA GAAGGGGGCC
AGGCTTGTCT GGGCCGATGT GGACCTGCAC AGCCGCGTGG TCACCGCCGA AAGCATTGAA
AAAGTGCTTA CCCCGCGTAC CAGGGCCGTG GTGGTCGTGC ACCTTTACGG CTATGTGGCC
GACATGCCCG CCATTGCCGC CCTGTGCAAG GAACGCGGCC TTATCCTCAT CGAGGACGCC
GCCCAGGCCA TAGGGGCCGA AGTAAACGGC ATCAAGGCCG GAGCCTTCGG GGATATGGGG
GTCTTCTCGT TCCACTCGCA CAAAAACCTG ACCACCCTGG GCGAAGGCGG CATGCTGTAT
GTGCGCGACC CCAAGCTGGC GGGCATGGTT CCCACCCTGC GCCACAACGG GCATTGCGCC
TTTGATTTTG AGCGCCCCGA TTACTGGAAG CCCGCCATGG GCAATGTGGA CATGCCCTTT
ATCGACGGCC GCATGGTGCC GCCCAACAAC TACTGCCTGG GCGAAGTGGA ATGCGCCCTC
GGAACCAAGC TGCTGGAACG TATTGACGAG ATCAACGGGC AGAAGCGCAG CCGCGCCCTG
GCCTTCATTG ATGCCCTGGC GGACTTTCCC GAACTGGAAT TCCATCGGGT CGACAGCCCC
CGCCACAACT ACCATCTGCT TGCGGCCCGC ATGACCACGG GCGTGGAGGC GCGGGATCGC
TTCATGCGCG CCATGTTCAA TGAAAAGGGC GTCAAATGCG TGGTGCAGTA TATCCCGCTG
GACAGGTACG ACTATTACCG CCGCCTGGGC ATGGGCGAGG CCTGTTGCCC CAATGCGGAC
CTGTTCTTTG ACACTATGAT TTCTTTCCCC TTCCAGCACT GGCTGACCGG GGAAGAATTT
GACTATATGC TCGCTTCCAC CCGCGAGGTA CTGGCGAGCC TGCGCTAA
 
Protein sequence
MDIKVNFSGR AIRYTEEEIA VVVEAMRNAD PLTQGHHMRR FESRFAEYQG VPQGTCFTTM 
NGCSALELSA QLCLFNEGDE VVIPSHTFTA SAYPYIKKGA RLVWADVDLH SRVVTAESIE
KVLTPRTRAV VVVHLYGYVA DMPAIAALCK ERGLILIEDA AQAIGAEVNG IKAGAFGDMG
VFSFHSHKNL TTLGEGGMLY VRDPKLAGMV PTLRHNGHCA FDFERPDYWK PAMGNVDMPF
IDGRMVPPNN YCLGEVECAL GTKLLERIDE INGQKRSRAL AFIDALADFP ELEFHRVDSP
RHNYHLLAAR MTTGVEARDR FMRAMFNEKG VKCVVQYIPL DRYDYYRRLG MGEACCPNAD
LFFDTMISFP FQHWLTGEEF DYMLASTREV LASLR