| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2196 |
|---|
| Symbol | |
|---|
| ID | 7285912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2646090 |
|---|
| End bp | 2647406 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643583018 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_002480770 |
|---|
| Protein GI | 220905458 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCG TAATGCTTTC GCGTCTGCAA TTCGCTGTGG CCGTGTTTTT TCACTTTGTT
TTCGTGCCTC TCACGCTGGG CCTCTCGGTA ATTATTGCCT GGATGGAAAC CCGCTATGTA
CGGACCGGGG ACGAATTCTG GAAAAAACAG ACCAAATTCT GGGGAAAACT TTTTGTCATC
AACTTTACCT TGGGCGTGGT GACCGGGATT ACACTGGAAT TCCAGTTCGG CACCAACTGG
TCAAGGTATT CTGAATATGT GGGCGATATT TTCGGCTCGC TGCTTGCCAT TGAAGCCACG
GTGGCCTTTT TTCTCGAGTC CACCTTTCTG GCGGTCTGGC ACTTCGGCTG GAACCGTGTG
GGCAAGAAGC TGCACCTCGC CTCCATATGG CTTGTGGCCA TCGCAGGCAA TATTTCTGCG
CTCTGGATCA TTCTTGCCAA CGGCTTCATG CAGAACCCCG TGGGCTACTA CATCAACGAA
GCCAACAACC GCGCCGAGCT TTCAAGCTTT TATGATGTCG TTACAAACCC CTACGCCTGG
GGCATGTATG CGCATACCGT CATAGCCTCG TGGGCGCTCG GCGGTTTCTT TGTGCTTGGC
GTTTCGGCCT GGCATCTGCT GCGCAAGAGC AATACCGAAT TTTTCAGCCG TTCTTTCAGG
ATGGTGGCGC CTTTTACCCT GATCTTCGTG CTGCTGCTGG CCCTTTCCGG CGACCAGCAG
GGCAAGACCG TGGCCAAGTA TCAGCCTGCC AAGCTGGCCG CTATGGAAGC GCACTGGGAA
ACACAGTCTG ACGTGCCTTT CTATCTGCTG GTGTGGCCTG ACCCGGAAAA TGAAACAAAT
ACCGTGCAGG CCCTCGGCAT TCCCGGCCTG CTGAGCTGGA TCGCCTTTGA CGATGTGCAC
GCCGAGGTGA AGGGCCTCAA GGCTTTTGCC AAGGAAGACC GGCCCCCGGT ACTGCCCGTG
TTTTTGACAT TCCGCACCAT GGTGGCCCTG GCGGGCATAT TTCTGGTGCT TTCGGCATGG
GCCTTTTTCC AGCGCAAGAA GGAAAACCCC AACCCGTTGC TGCTCAGGCT GCTGGTGTAC
AATATTCCAC TGCCCTACAT CGGCCTGATG GTGGGCTGGG CCGTGACGGA AATCGGCCGC
CAGCCATGGA TCGTCTATAA TCTCATGCGC ACCACAGATG CCGTTTCGCC CATACCGGCC
GACAATGTGG TCATTTCTCT GGTGGCCTTT ATCGGCGTAT ACTCGCTGCT TGGCATTCTG
GACATCTATC TGCTGCGCAA ATTTGCCATC AAGGGCCCGG ACGCCCAGGA GGTGTAG
|
|---|
| Protein sequence | MDVVMLSRLQ FAVAVFFHFV FVPLTLGLSV IIAWMETRYV RTGDEFWKKQ TKFWGKLFVI
NFTLGVVTGI TLEFQFGTNW SRYSEYVGDI FGSLLAIEAT VAFFLESTFL AVWHFGWNRV
GKKLHLASIW LVAIAGNISA LWIILANGFM QNPVGYYINE ANNRAELSSF YDVVTNPYAW
GMYAHTVIAS WALGGFFVLG VSAWHLLRKS NTEFFSRSFR MVAPFTLIFV LLLALSGDQQ
GKTVAKYQPA KLAAMEAHWE TQSDVPFYLL VWPDPENETN TVQALGIPGL LSWIAFDDVH
AEVKGLKAFA KEDRPPVLPV FLTFRTMVAL AGIFLVLSAW AFFQRKKENP NPLLLRLLVY
NIPLPYIGLM VGWAVTEIGR QPWIVYNLMR TTDAVSPIPA DNVVISLVAF IGVYSLLGIL
DIYLLRKFAI KGPDAQEV
|
|---|
| |