Gene Ddes_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2181 
Symbol 
ID7285897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2632779 
End bp2633387 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID643583003 
ProductShikimate kinase 
Protein accessionYP_002480755 
Protein GI220905443 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.296368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCA TCTTTCTCGT AGGCCCCAGA GCCTGCGGCA AAACCACCGT AGGGCGCACC 
CTGGCCCGGC GGCTTGGCCT GCCCTTTGTG GATACGGACC ATTTTCTCCA TCACCAGACG 
GGGCGCACCG TGGCCCAGAT AGTCGCAGCC GAGGGCTGGC CCGGCTTCCG CCGCCTCGAA 
AGCGAGGCCC TGCGCGCCAC AGCCGGGCTG CATCAGACTT CCGGGGCCGT TATCGCCACC 
GGCGGCGGTA TGGTCCTGGA CGCACAAAAC CGCGCCTTCA TGCGTGAGCA GGGGTGCGTG 
TTCTATCTGT CGGCTTCTGC GGAAGCACTG GTCGCCCGTC TGTCGGGCAA CCCTCTTGCT 
GCTCAAAGGC CCTCGCTCAC CGGAACCGAC ATCAGGGAAG AAGTTGCCCA GGTCCTGCAG 
GAGCGGCTCC CCCTCTATGA ACAGACCGCC CACCACCGGC TTGATGCGGC GCTTTCGCCC 
GGGCGCATCT GCGCACAGGC CCTGACCCTG CTGTGCGGGC CGGACGATCC AGCCGCACCG 
ACTGTGCCGG AAAGCGGCAA GGACATCCCA CAAGCCCCCG CTCCGGACGG AGGTGCCACG 
AGTGCATAG
 
Protein sequence
MPLIFLVGPR ACGKTTVGRT LARRLGLPFV DTDHFLHHQT GRTVAQIVAA EGWPGFRRLE 
SEALRATAGL HQTSGAVIAT GGGMVLDAQN RAFMREQGCV FYLSASAEAL VARLSGNPLA 
AQRPSLTGTD IREEVAQVLQ ERLPLYEQTA HHRLDAALSP GRICAQALTL LCGPDDPAAP 
TVPESGKDIP QAPAPDGGAT SA