Gene Ddes_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2168 
Symbol 
ID7285884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2612585 
End bp2613229 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID643582990 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002480742 
Protein GI220905430 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID[TIGR02354] thiamine biosynthesis protein ThiF, family 2 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA GAACATCCGT AACAAATCCC CTGTGCCAGG GGCTTGCCCG CTATATGGCC 
CCGGAGCAGC TGGCAATCTT GCAGCAGGCC CGCATTGGCA TCGCCGGTGC GGGCGGTCTC
GGTTCCAATG CGGCCCTTAT GCTGACCCGC AGCGGCGTGG AGCACCTGAC TCTGGTGGAT
GATGACGTGG TGGACGCTTC CAACCTGAAC CGGCAGCAGT ACTGGCCGCG TCATGTGGGC
CGCTGCAAGG TGGACGCCCT GCATGAAATA TTGCTGGAGC TGAACCCCCG GATGATGGTG
GACTCCCGCA AAATGCGCAT TACCAGCGCC AGCCTGCCGG GCCTGCTGCC TCTCTGCCCC
ATATGGGTGG AGGCCCTGGA CAATCCTGAA GACAAAAGCC TTTTTGTTGA AAGCGCCCTG
CTGGCTGGGC ACCGGGTCGC CAGCGCCTCC GGCATGGGGG GCTTCGGCGG TGCTCCCATG
GGGCGACGCA GGCTCGGCAA CCTCGTGCTG GTGGGTGACT TTACTACAGA TATTCTCATG
GCTCCGCCGC TCGCACCCCG CGTAACAGAG GCGGCGGCCC TGCTGGCCGA TGCCGTGCTG
GAAATGCTGC TCGGCGGTCC ACATATGCCG GAAACCGCGC TTTGA
 
Protein sequence
MKERTSVTNP LCQGLARYMA PEQLAILQQA RIGIAGAGGL GSNAALMLTR SGVEHLTLVD 
DDVVDASNLN RQQYWPRHVG RCKVDALHEI LLELNPRMMV DSRKMRITSA SLPGLLPLCP
IWVEALDNPE DKSLFVESAL LAGHRVASAS GMGGFGGAPM GRRRLGNLVL VGDFTTDILM
APPLAPRVTE AAALLADAVL EMLLGGPHMP ETAL