Gene Ddes_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2154 
SymbolgatA 
ID7285870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2597673 
End bp2599133 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID643582976 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_002480728 
Protein GI220905416 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA TATGCTCCCT CTCTCTCACG GCTGTGGCCC AGGCCCTGCA AAAAAAAGAA 
CTGAGCGCGG TGGATGTCAC CACGGCCTGC CTTGACCGCA TCACCGCCAC AGAGCCGCAT
CTGGCCGCCC TGCTTTACGT GAATGCCGAA AACGCGCTGG CCCGTGCCAC CACGCTGGAC
AGCGAAGGCC CCGATGCCGC ACGGCCGCTG TGGGGTGTAC CTGTCACGCT CAAGGACGCC
TTTTCCACCA GGGGCATGCC CACCACGGCC GGTTCGCGCA TGCTTGAAGG CTATACGCCC
TTCTACGATG CCTTTGCCGT GCAAAAACTG CACGAAGCCG GGGCCGTCAT TCTGGGCAAA
ACAAACCTGG ACGAGTTCGC CATGGGCTCC AGCACGGAAA ACTCGGCCTT CAAGGTCACA
CGTAATCCCT GGAACCTCAA CAAGGTTCCG GGCGGGTCCA GCGGCGGCTC CGCCGCGTCG
GTAACAGCCG GACAGTGCTT CGCTTCTCTG GGAACCGACA CCGGCGGCTC CATACGCCAG
CCTGCGTCCT TCTGCGGCTG CGTGGGCCTC AAGCCCACAT ATGGGCGGGT TTCGCGCTAC
GGGGTCATCG CCTATGGCTC GTCCCTTGAT CAGGTCGGCC CCCTCACACG TAGTGTGGAA
GACTGCGCCC GCGTACTGAC GGCCATTGCC GGATATGATT CACGCGACAA TACCTGCGAT
CCGCGCCCGG CAGAAGACTA TGCCGCGACT CTGTCTTCGC GGCCCCTCAA GGGCGCGCGC
CTGGGCATTC CCAGGGAATT TTACGGCCAG GGGCTGAGCG ACGAGGTGCG GGCAGCCTGC
GAGGCCGCCA TACAGGCCGC CAGAAACCAG GACGCGGAAC TGGTGGAAGT AAGCCTGCCC
CACACGGATG CGGCCATTGC CACCTACTAC ATTATCGCCA TGGCCGAAGC CAGCTCAAAC
CTGGCCCGCT TTGACGGCGT ACGCTTCGGC CACCGCTCGG CAGACATCAA AAACCTTGAC
GATCTCTATG TACACAGCCG CACCGAGGGC TTCGGGCCGG AAGTCAAGCG CCGCATCATG
CTTGGGGCCT ACGTGCTGTC ATCCGGCTAT TACGATGCCT ACTACCGCAA GGCCGCCCAG
GTGCGCCGTC TTATCCGTGA TGAACTGCTC GCGGCTCTCG GCCAGTGCGA TGCCCTGCTG
GCTCCCGTAT CGCCCGTGAC CGCGCGCGAC CTGGGCGGCA ACACCGCTGA TCCCCTGCAG
ATTTACCTTA TGGACGCCTA TACCCTGTCC CTGAACCTGG CCGGCCTGCC GGGCCTCTCC
TTGCCTGTGG GCCTTGGGGC AAAAAGCGGC ATGCCCGTGG GCATGCAGAT CATTGGCAAG
CCTTTTGAAG AAACGCAGGT GCTGGCCCTT GGGCACAGCC TGGAGCAGGC ACTGCCCGGC
ATCGGCAGGC CTGCGCTGTA A
 
Protein sequence
MTDICSLSLT AVAQALQKKE LSAVDVTTAC LDRITATEPH LAALLYVNAE NALARATTLD 
SEGPDAARPL WGVPVTLKDA FSTRGMPTTA GSRMLEGYTP FYDAFAVQKL HEAGAVILGK
TNLDEFAMGS STENSAFKVT RNPWNLNKVP GGSSGGSAAS VTAGQCFASL GTDTGGSIRQ
PASFCGCVGL KPTYGRVSRY GVIAYGSSLD QVGPLTRSVE DCARVLTAIA GYDSRDNTCD
PRPAEDYAAT LSSRPLKGAR LGIPREFYGQ GLSDEVRAAC EAAIQAARNQ DAELVEVSLP
HTDAAIATYY IIAMAEASSN LARFDGVRFG HRSADIKNLD DLYVHSRTEG FGPEVKRRIM
LGAYVLSSGY YDAYYRKAAQ VRRLIRDELL AALGQCDALL APVSPVTARD LGGNTADPLQ
IYLMDAYTLS LNLAGLPGLS LPVGLGAKSG MPVGMQIIGK PFEETQVLAL GHSLEQALPG
IGRPAL