Gene Ddes_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2144 
Symbol 
ID7285860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2584842 
End bp2587067 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content65% 
IMG OID643582966 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_002480718 
Protein GI220905406 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATC TCTCCCTCGC CTCGCGCTAC CGCCCCCAGA CCTTTGCCCA GGTGGCGGGA 
CAGGATATGG TAAAAGCCGT CCTTTCCCGT GCCGCCGCCG AGGACAGGCC CGCTGCGGCC
TATCTTTTGA GCGGTACGCG CGGCGTGGGC AAGACCACCA TTGCCCGCAT TTTCGCCAAG
GCCCTCAATT GCGAGCATTC CCCCGGTCCC GAACCGTGCA ACGAATGTGC CCAGTGCCGC
AAGATCACCC AGGGCGTGCA CGTGGACGTA ACGGAAATTG ACGGCGCGTC CAACAACAGT
GTGGAAGATG CCCGCTCGCT GCGCGAAACC ATCGGCTACG CCGCCATGGA AGGCCGTTAC
AAGGTCTTCA TCATCGACGA AGCCCACATG CTCACGCGCA ACGCCTTCAA CGCCCTGCTG
AAAACTCTTG AAGAGCCGCC GGAGCGCGTG GTCTTCATCT TTGCCACCAC CGAGGCACAC
AAGTTCCCCG TGACCATTGT GAGCCGCTGC CAGCATTTCG TGTTCCGCCA CCTGAGCAAA
GACGCTCTGG TCGAGCACCT TTCCGGTGTG CTGCGCAAGG AAAATGTCAC CTTTGAAGAC
AGCGCCGTAC GCCTGCTGGC CCGCCGCGCG GCGGGCAGTG TACGCGACAG CATGTCCCTG
CTGGACCAGA CCCTGGCCCT GGGCGGCGAA CAACTCACAG CCGCCGCCAC GCGGCAGGTG
CTGGGCCTGG CCGGACAGGA AATGTTCGCT GAACTTTTCG AGGCCCTGCA CGCGCAGGAC
TGCCCCGCCG TGGCCGGACT CTGCCGTCAG ATATTGCAGC AGGGCGTGGA TATCGGCTTT
TTCGTGCGAG AACTGGCCGG CAACCTGCGC AATCTTTTTC TTTTGCGGCA AGGCGGCGCG
GCAGTGGCTT CCAGCCTGCA ACTGCCCGCT GACGAGGCTG CCCTGTGGCA GGGGCTAGCA
CCGCGTTTTT CCACGGCCCA CCTGCATGCA GCATGGCAGA TGACGCTGGA CGCCCAGCGC
GGCATCGTGC AAAGCCCGGA ACCGGCAGCC GCCCTGGAAC TGCTGCTGCT TAACCTGGCC
CTGCTGCCGC AACTGCTGCC CGTTGGGCAG GTAACGCCGG ACCAGATGCC CGCGGGTCCC
CCAGGCGCGG CCCCGGCCGA CGCAAACCAA CCGCCTTCCG GCTCCACGTC CGGTCCCGCT
TCCAGCATGC CGCATGGCGG ATACAGGTCG GGGCAGCCGC CACACGCAGG AGCAGAAGCG
GCCCGCCACA ACGCCGGAAC GCCGGACGAC GCCCCGGCCG CTTCGGGCAT GGGCAAAAGC
GCAGCCCGCC CACGGGCCAC CACCACTGCC GCCCGCCCCA CCACAGATGG CGAAGAGGCC
GAAACACCCG ACCCTGCTCC AGCCTGTGAC CACAGCCGGA ACCAGCCGTC CGGGCAGGAC
GAAAATCTCA CCCGGGGCCA AAACAGTCCG CACAGCAATC AGGGGCGCCA CCCGGACAAA
TCCCATACAA GTGACCAGCG TGACGTGCGG GCCGAAGGCC GGACAACGCC CCCGTACAGT
GCTCACCGTC GCGCCCCAGG CAATGGCTTT TCCACCCCGC CGGACGCGCC CCAAGACGGA
GCGCCAGCGC AGACACCCCA TACGGAAGCC CCCGGCCCTG ATATGGACGG CGCACCCTGG
ACAGGCCAGG ACGAAGATTA TGCGCCCTAC GAAGATGACG CCCTGACGGA AAGCCCGGTT
GCGCAAAACT GGCCGGGCCG CCGGAACGCC ACAAGGCGGA CGGACAGTTC CGGGCAAAGT
GCTACAGGCC AGGACCGCAG GGACAGGCAG ACGCAACAAG ACGCCCCGGC TGCAGCACCG
GCCAGCCCCG GCGGGCGTAG CCGCAACTGG CAGAATTTTT ACGATTTCTG CGTGGCGGAA
CAGGCTGCCT CGCGCCCCGT TCCGGCTCCT TACGTACTGC GCGGCATAGG GGTGGACTGG
CAAGGCAGTA CGCTGCGTTT GCAGCCCAGA ACAGAAACGC AGCTGCATCA GCTTGAAAAA
CAGGCCAAAG CCCTGTATGC CGCACTGGCC GCCTATGGCG CGCCGGAAAC GCAGGTAGAG
ATTATCGCCC CCAAGCCGCA CCGGCCGGAG GCGGACCTTA TTGCCGAGTT CAGCCGCAAG
GAAGAGCTGC AGCCATGCTT TGAGGTGCTG AACGCCTCGC TGAAAGGCTG CCGCCCCATA
GACTAG
 
Protein sequence
MKHLSLASRY RPQTFAQVAG QDMVKAVLSR AAAEDRPAAA YLLSGTRGVG KTTIARIFAK 
ALNCEHSPGP EPCNECAQCR KITQGVHVDV TEIDGASNNS VEDARSLRET IGYAAMEGRY
KVFIIDEAHM LTRNAFNALL KTLEEPPERV VFIFATTEAH KFPVTIVSRC QHFVFRHLSK
DALVEHLSGV LRKENVTFED SAVRLLARRA AGSVRDSMSL LDQTLALGGE QLTAAATRQV
LGLAGQEMFA ELFEALHAQD CPAVAGLCRQ ILQQGVDIGF FVRELAGNLR NLFLLRQGGA
AVASSLQLPA DEAALWQGLA PRFSTAHLHA AWQMTLDAQR GIVQSPEPAA ALELLLLNLA
LLPQLLPVGQ VTPDQMPAGP PGAAPADANQ PPSGSTSGPA SSMPHGGYRS GQPPHAGAEA
ARHNAGTPDD APAASGMGKS AARPRATTTA ARPTTDGEEA ETPDPAPACD HSRNQPSGQD
ENLTRGQNSP HSNQGRHPDK SHTSDQRDVR AEGRTTPPYS AHRRAPGNGF STPPDAPQDG
APAQTPHTEA PGPDMDGAPW TGQDEDYAPY EDDALTESPV AQNWPGRRNA TRRTDSSGQS
ATGQDRRDRQ TQQDAPAAAP ASPGGRSRNW QNFYDFCVAE QAASRPVPAP YVLRGIGVDW
QGSTLRLQPR TETQLHQLEK QAKALYAALA AYGAPETQVE IIAPKPHRPE ADLIAEFSRK
EELQPCFEVL NASLKGCRPI D