Gene Ddes_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2142 
Symbol 
ID7285858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2581571 
End bp2583652 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content67% 
IMG OID643582964 
ProductHydantoinase/oxoprolinase 
Protein accessionYP_002480716 
Protein GI220905404 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA CAGACATGAA AAATACGGCA GATACTTCCG TATATTTGCT GGGAATCGAT 
GCCGGAGGAA CCCATACCGA TGCGGTTTTG CTGATGGAGG ACCCCGGGGG GCATCCGTCC
GGCAGGGCGG ACGCGTCGCC CGAAGGGCAT GCCGCAGCTG CCCTGAACGC CGCTGACGAC
ACACATGTGG CATACGCGCC CCATGTATCG GAACAGCCGG AAAAACAGGC TGTTCCGGGC
GCGGCGTTGC CCCGTATGCG TATTCTGGCC GCTGCCAAAA CGCCCACGCG GCATGATGAT
ATGCCCGCGT CCATTGGCGA GGTGCTGGCG GCCCTGACAA CCGCGCTGGA CAGTGACCCG
ATCCTGGCCA CCTCTGGCGG CGCGGCGCTG CTCGGGCGGG TGAGCCGGGT CACCCTTGGG
GCTACGCTGG CTGTCAACGC CCTTGTGCAG GGCAAGGCTG ATGCCGTGGG ACTGGCCTTG
TCTGCCGGGC CGGGGCTTGC TCCCGGCCGT TTTGCCCTGG GGCGGCATGT ATGTGTAGTT
CCCGGCGGTC TTGATCACAG GGGGGTTGAA GTCAGCCCGC TGGATGTTGC GGGCCTGGAG
CGTCAGGCTG CCCTGTGGAA AGAGGAAGGC ATCACCGCCG TGGCTTGCGT GAGCAAGTTT
TCGCCGCGTA ATCCGGCGCA CGAGCAGGCC ATGGCCCGGG CTGTGGCGCG CGCGTACGGC
CCTTCCTTGC GCCGGGATGC ACCCTCGGAC CGCGTACCGG AGGCAGAACC AGCCGTGCCG
GGCATTACTG AGGGGCACAG GCTTTCCGGC CGTCTCAGCT TTCCGCGGCG TATCGCCACC
GCCTATTTCA ACGCTGCCGT GCAGCGCCTG CACGTCAGTT TTCTGGAGGC CGCGGAGAGC
GCCCTTGCCC GGGCCGGAGT ATCCGCCGCG GTGCGCCTGC TCAAGGCTGA CGGCGGGGCC
GTGCCGCTGA GCCTTTCACG GCAGGAGCCG GTGCAGTCCA TCCTTTCCGG CCCGGCAGCC
AGCGTTATGG GCGTGCTGGC TTTGTGTCCG GCCGCGTGCC AGGGCTGCGG GCTGCTGCTG
GATATGGGCG GCACCACCAC AGACATGGCC CTTGTGGCGG ACGGCTCCCC GGTGGTGGAC
AGGGACGGCA TGGTCCTTCA GGGACGGCGT ACGCTGGTGC GCGCGCTGGC TTCGGTTTCC
ATCGGCGTGG GTGGTGATTC GCTTGTCAGC GTCGAGGGCA GCGGCCATGA GGCCGTAGTG
CGCGTGGGAC CGCTGCGGCA GGGACCTGCC GTGGCCTTTG GCGGCAGCCT GCCAACCCTG
CTGGATGCCC TCAACACACT GCACAGCCAA CCCTGTTCCG GGTTGGAAAA TTTAACGGAA
AACCCGGCGG CCAACGCGGC AGAAAATCCG GCAGCAAGCG GCGCTGCGGC ACAGGCCACC
GCACAACTTG CAAAAACAGC AGGGGATGTG GCTGCTTCGG TGGAGAGCAT GGGGCATCTG
GCTCGGCGGC ACGGCCTTGC ACCCCAGGTT CTGGCCCGCA AGGCTGTGGA CGACGCCCTC
GCCCGGATAG TTGCAGCTGC CCATGAACTG GTAGAGGACA TCAACGCCCG TCCCATTTAT
ACCCTTGCGG GGCTGAAGGC GCTGCGTCAG GCGCGGCCCC TGCACGCCTG GCTCATGGGC
GGCCCGGCAG ACTGCATGAG AACGCACCTG GCCGCTGCGC TGGGCCTGCC CGTAAAATGC
CCGCCCCACG CCGCGGTGGC CAATGCCGTG GGCGCGGCCC TGACCCTGCC CACGGATTCG
CTGGAAGTTT ACGCAGATAC CGGCCGCGGC ATTCTGCGCG TTCCGGCTCT GGACCTGACG
GAAAATATCC ACCGGGGCTA CAGTCTGGAC GCCCTTGGTG AACGCGCCCG TGATCTGCTG
CTGGAAAAGC TCGAACGGGG CGGAGCGCAC GGGGCCGCAG TGGAGATCAC CGGAGCAGAA
TCGTTCGCCA CGCTGGACGA CAGCGGCCGC AGCAGCCGGG ACATGCGCGT GGTCTGTCAG
GCTGTGCCGG GACTGGCTGG CCGGGTGGTC CAGAGCCATT AA
 
Protein sequence
MKYTDMKNTA DTSVYLLGID AGGTHTDAVL LMEDPGGHPS GRADASPEGH AAAALNAADD 
THVAYAPHVS EQPEKQAVPG AALPRMRILA AAKTPTRHDD MPASIGEVLA ALTTALDSDP
ILATSGGAAL LGRVSRVTLG ATLAVNALVQ GKADAVGLAL SAGPGLAPGR FALGRHVCVV
PGGLDHRGVE VSPLDVAGLE RQAALWKEEG ITAVACVSKF SPRNPAHEQA MARAVARAYG
PSLRRDAPSD RVPEAEPAVP GITEGHRLSG RLSFPRRIAT AYFNAAVQRL HVSFLEAAES
ALARAGVSAA VRLLKADGGA VPLSLSRQEP VQSILSGPAA SVMGVLALCP AACQGCGLLL
DMGGTTTDMA LVADGSPVVD RDGMVLQGRR TLVRALASVS IGVGGDSLVS VEGSGHEAVV
RVGPLRQGPA VAFGGSLPTL LDALNTLHSQ PCSGLENLTE NPAANAAENP AASGAAAQAT
AQLAKTAGDV AASVESMGHL ARRHGLAPQV LARKAVDDAL ARIVAAAHEL VEDINARPIY
TLAGLKALRQ ARPLHAWLMG GPADCMRTHL AAALGLPVKC PPHAAVANAV GAALTLPTDS
LEVYADTGRG ILRVPALDLT ENIHRGYSLD ALGERARDLL LEKLERGGAH GAAVEITGAE
SFATLDDSGR SSRDMRVVCQ AVPGLAGRVV QSH