Gene Ddes_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2106 
Symbol 
ID7285822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2537558 
End bp2538304 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID643582928 
ProductABC transporter related 
Protein accessionYP_002480680 
Protein GI220905368 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.61282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAG CAATTGACAT AGTCAAATCA TATAGCGCAG GCGGCGTGTC TGCCCCGGTG 
CTGCGCGGCG TGAACCTGCA CATTGAGCAG GGAGAATTTG TAGCAGTCAC AGGCCGTTCA
GGTTCGGGTA AATCCACCCT GCTCAACGTG CTTTCCACCC TGACAGAGCC TGACAGCGGA
CAGGTGCTTT TTGAGGGGGC CGATTTGCGC GCCATGCGCG AAAAACAGCG TGACCATTTG
CGTAACAGTG CCTTTGCCAT GATTTTTCAG GCGCATCACC TTATGCCCTA TCTTACGGTG
ATGGAAAATG TGCTGCTGCC CGGGGCCAAC ACCTTTCGCG GCATACCGGA AGAACTGCGT
CGCAGGGCAT CTGCCTGCCT GGAGCGGGTG GGGCTGGAAC ACAAAAAAGA CAGCCTGCCC
TCATCCCTTT CCGGTGGCGA ACAGCAGCGT GTAGCCATTG CCCGCGGCCT TGCCGCCGCA
CCGCGTGTGC TTTTTGCCGA CGAGCCTACC GGCAGCCTGG ACATGGCTAC CGGCGATGCC
ATCATGCAAC TTTTGCAGGA GCTGAACAGC GAAGGCCTGA CCATCGTCAT GGTCACCCAT
AACCCGGACT ATGCCGCGCT GGCCGGCCGC AGTGTGCACA TGCTGGAAGG CAGTATGGGG
CAGGCCCCCA CACCGGCATT GGCAGTTGAC AGACGCGCCC CTGTAGGTAA TGGAAGAACT
AGTCTTTCAC CAAGGGAGTT TTCATGA
 
Protein sequence
MLEAIDIVKS YSAGGVSAPV LRGVNLHIEQ GEFVAVTGRS GSGKSTLLNV LSTLTEPDSG 
QVLFEGADLR AMREKQRDHL RNSAFAMIFQ AHHLMPYLTV MENVLLPGAN TFRGIPEELR
RRASACLERV GLEHKKDSLP SSLSGGEQQR VAIARGLAAA PRVLFADEPT GSLDMATGDA
IMQLLQELNS EGLTIVMVTH NPDYAALAGR SVHMLEGSMG QAPTPALAVD RRAPVGNGRT
SLSPREFS