| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2100 |
|---|
| Symbol | |
|---|
| ID | 7285816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2529180 |
|---|
| End bp | 2531141 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643582922 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002480674 |
|---|
| Protein GI | 220905362 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.524548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAG GCGTTTTCGT CTGCCATTGC GGCAGCAATA TCGGCGGCAC CGTTGACTGC
GCCAAGGTGG CTGAGATTGC CCGCACCTAC CCTGACGTGG TGTACGCCGA CGACCCCATG
TACACCTGTG CCGAACCCGG CCAGGCAGCC ATTGAGGCAG CCATTCACGA GCACAAGCTT
GACGGCGTTG TGGTGGCTTC CTGTTCGCCC CGCATGCACG AGCCGACCTT CCGCCGCACG
GTGGAACGCG CGGGGCTCAA CCGCTACATG CTCGAAATGG CGAATATTCG CGAGCATGTC
TCGTGGATTG GCCGCGACAA GGAAGCCAAT ACCAACAAAT CCGCCGAACT AGTTTTGCTG
GCGGTTGAAA AGCTGCGCAA CAACAAGCCG CTGCTCGCCA AAAGCTTTGA CGTCAACAAG
CGCGTGCTCG TCATCGGCGG CGGCGTGGCG GGCATTCAGG CCGCCCTTGA CTGCGCCGAC
GGCGGCGTGC CCGTGGTGCT TGTGGAGCGT GATGCCACCA TCGGCGGCAA AATGGCCAAG
CTGGACAAGA CCTTTCCCAC GGTGGACTGC TCGGCCTGCA TTCTCGGCCC CAAGATGGTC
GACGTGGCCC AGCACTCCAA CATCACGCTG TATGCTTATT CCGAGGTGGA AGACATTTCG
GGCTATGTGG GCAACTTTAC GGTGAAAATC CGCAAAAGGG CCACCTATGT AGACTGGAGC
CTCTGCACCG GCTGCGGAGC CTGCACAGAA AAATGCCCCA GCAAAAAAAC GCCTGACGCC
TTTAACGAAG AGATCAGCAA CACCACGGCC ATCACCATTG CCTTTCCGCA GGCCATCCCC
AAAAAGGCCG TCATCAACGC CGGGCACTGC CGCCAGTTCA TCAAGGGCAA GTGCGGCGTA
TGCGCCAAAA TATGCCCCAC CGGGGCCATC AAGTATGACA TGGAAGACGA GATCATAACC
GAAGAGGTGG GCAGCATCGT GGCCGCCACC GGCTATGACC TCATGGACTG GACCGTGTAC
CAGGAATATG GCGGCGGCGC TTACCCCGAC GTTATCACGT CCCTGCAGTA CGAGCGGCTG
CTCAATGCCT CCGGTCCCAC TGCCGGGCAT ATCAAACGCC CCTCGGACGG CAAGGAACCC
AAAAACATCG TTTTCGTGCA GTGTGTCGGC TCGCGCGACA AATCCATCGG GCGGCCCTAC
TGCTCCGGCT TCTGCTGCAT GTATACGGCC AAGCAGGCCA TCCTGACCAA GGATCACATT
CCGGATTCCC AGTCCTATGT CTTCTATATG GACATCCGCG CCGCAGGCAA GATGTACGAC
GAGTTTACCC GCCGCACCAT GGAAGAATAC GGTACGGAAT ACATCCGCGG GCGCGTCTCG
CAGATATACC CCGATGGTCA GGGCCAGCTC GTGGTTATGG GCGTAGACAC GCTTATGGGG
CAGGCCATTG AAATCAAGGC CGACCTTGTG GTTCTGGCTG TAGGTATCGA GGCCAGCAAG
GGCGCACCTC AGCTGGCTGA AAAGCTGCGT ATTTCATACG ACAGCTACGG CTTTTTTATG
GAAAGCCACG TCAAGCTCAA GCCTGTAGAA ACCAATACCG CCGGTGTGTA TCTGGCGGGC
GTGTGCCAGG GGACCAAGGA TATTCCCGCT TCCGTGGCCC AGGGTTCGGC TGCGGCCGCC
AAGGTGCTGG CCCTCTTTGC CAAAGACAAG CTGGAAAGCG ACCCGCAGAT CGCCCAGGTG
GACATGCGCC GCTGCGTCAA CTGCGGCAAG TGCATCCAGT GCTGCCCCTT CGGAGCCATC
AAGGAAGTGG AAGTCCGGGG CGAAGGTAAG GCCCAGGTTA TTGAAACCGT GTGCCAGGGC
TGCGGGCTTT GCACGGCCAC CTGCCCCCAG GGGGCCATCC AGCTTTCACA CGCCACAGAC
AACCAGATTC TTGCGGAGGT TAACGCGCTA TGCCAGCTTT AG
|
|---|
| Protein sequence | MRIGVFVCHC GSNIGGTVDC AKVAEIARTY PDVVYADDPM YTCAEPGQAA IEAAIHEHKL
DGVVVASCSP RMHEPTFRRT VERAGLNRYM LEMANIREHV SWIGRDKEAN TNKSAELVLL
AVEKLRNNKP LLAKSFDVNK RVLVIGGGVA GIQAALDCAD GGVPVVLVER DATIGGKMAK
LDKTFPTVDC SACILGPKMV DVAQHSNITL YAYSEVEDIS GYVGNFTVKI RKRATYVDWS
LCTGCGACTE KCPSKKTPDA FNEEISNTTA ITIAFPQAIP KKAVINAGHC RQFIKGKCGV
CAKICPTGAI KYDMEDEIIT EEVGSIVAAT GYDLMDWTVY QEYGGGAYPD VITSLQYERL
LNASGPTAGH IKRPSDGKEP KNIVFVQCVG SRDKSIGRPY CSGFCCMYTA KQAILTKDHI
PDSQSYVFYM DIRAAGKMYD EFTRRTMEEY GTEYIRGRVS QIYPDGQGQL VVMGVDTLMG
QAIEIKADLV VLAVGIEASK GAPQLAEKLR ISYDSYGFFM ESHVKLKPVE TNTAGVYLAG
VCQGTKDIPA SVAQGSAAAA KVLALFAKDK LESDPQIAQV DMRRCVNCGK CIQCCPFGAI
KEVEVRGEGK AQVIETVCQG CGLCTATCPQ GAIQLSHATD NQILAEVNAL CQL
|
|---|
| |