Gene Ddes_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2039 
Symbol 
ID7285755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2451824 
End bp2452927 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content63% 
IMG OID643582861 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002480613 
Protein GI220905301 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA GAACATTTCT GACCATTCTG GGAAGCGCGG GCGTGGTCTC GGCCCTTGGC 
TCAGCCAAGG TGGCCCAGGC CGGCCCCCAT ACCTTCCCAT ATTACGCAGA CAGTTACGGG
GTGCTGCACG ACACCACCCG TTGCATCGGT TGCCGCAAGT GTGAAGAGGC CTGCAACAAG
GTCAACCACC TGCCCAAACC CAAAAAACCC TTCAGCGACC TTACGGTGTG CGACACGCAC
CGCCGCACGG GCGAATATGA ATGGACCGTG GTGAACAAGT ACAAGGTCAA CGGCAAGGAC
GTATTCCGCA AGCTGCAGTG CTTTCACTGC AACGACCCGG CCTGCGCTTC CGCCTGCTTT
GCCAAGTGCT TTACCAAGCA GCCCAACGGC GCTGTTCACT ACGAAGGCTC ACAGTGCGTG
GGCTGCCGTT ACTGCATGGT CGCCTGCCCC TTCTATGTTC CCGGCTTCCA GTACGATGAG
GCCTTTGACC CCCTCGTGCA AAAGTGCACC TTCTGCGAGC CGCTGCTCAA GGAAGGCAAG
CTGCCCGGCT GTGTGCAGGC CTGCCCCAAG GACGCCCTCA CCTTCGGCCG CCGCAGCGAC
CTGATCCGAG TGGCCCGCGC CCGCATTGCC GATAATCCCG GCAAGTACGT CAACTACCTC
TATGGCGAGT TTGACGCAGG CGGCACTGCC TGGATGGTGC TCAGCCCCGC AGTGGGACAG
GCAGCCGCGG CTGTTCCGGC GGATGATGCT CCGCTGGCTG GCGATGAACT GAAGCAGCTC
GGCCTTGATA CCCATCTCGG CAACCGCCCC ATGGGCGAGC TGACCTACGG CGCTCTGGGC
GCAGTGCCTA TGATCGTGGC CTTCTGGCCC GTGCTCTTCG GCGGTGCTTA CGCCATCAGC
AAACGTCGCG AAGCCATGTA CAAGGCTGAA ACGGATGGCA AGGTCAAGGA GGCCCGTGAA
GACGTGGCCG CCGCCGTTGA CGCCGCCGTA CGCAAAATTG AGGAAACCCA GGGGCCGGGC
GCTGCCGATA CGGCCCGCCG CGCCATGACA GAGGCCCTCA AGGCCCGCGA AACGGCGTGC
ACGGGGCACG GGGAGGATAA GTAA
 
Protein sequence
MKRRTFLTIL GSAGVVSALG SAKVAQAGPH TFPYYADSYG VLHDTTRCIG CRKCEEACNK 
VNHLPKPKKP FSDLTVCDTH RRTGEYEWTV VNKYKVNGKD VFRKLQCFHC NDPACASACF
AKCFTKQPNG AVHYEGSQCV GCRYCMVACP FYVPGFQYDE AFDPLVQKCT FCEPLLKEGK
LPGCVQACPK DALTFGRRSD LIRVARARIA DNPGKYVNYL YGEFDAGGTA WMVLSPAVGQ
AAAAVPADDA PLAGDELKQL GLDTHLGNRP MGELTYGALG AVPMIVAFWP VLFGGAYAIS
KRREAMYKAE TDGKVKEARE DVAAAVDAAV RKIEETQGPG AADTARRAMT EALKARETAC
TGHGEDK