Gene Ddes_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2015 
Symbol 
ID7285731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2427990 
End bp2429264 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID643582837 
Productcobalamin (vitamin B12) biosynthesis CbiG protein 
Protein accessionYP_002480589 
Protein GI220905277 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2073] Cobalamin biosynthesis protein CbiG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00297302 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATCCTG TTTTTGAAAA AGATTCTCTG GCCTGTTATG CCCTGAGCCT TTCCGCACTG 
CCCCTTGCCC GGCGGCTCAA GGCTCTGCTT GCAAGCCAGC CCTGGACTGC GCCGGGGGGC
GGCCGTCTGG AGCATTGCCG TATTTTTACG CCGCAACGCT TTTGCCCGCC CGATGCGCAG
CCTTTTACGA GGCTTGGCGA CTTTCTTTCC ACCGCCTACC GGCAGCACGG CGCGCATATC
TTCATCGGGG CTGCCGGTAT TGCCGTGCGC GCCCTGGCCC CTCTGCTGAC GCACAAAAGT
CAGGATCCGC CGGTTCTAGT GCTGGACGCC GCCGGCAACT ACGTCATCAG TCTGATTTCC
GGTCACTGGG GTGGGGGCAA CCATCTGGCC CGCCATGTGG CGCTTCTGTT GCGGGCCACT
CCCGTCATCA CTACAGCGTC CGATGTTTCT ATAGAAGAGG GGAGCCTTTC CGCAACAGGG
CACGGGCATG CAGAAGCAGA AGCGGCAGGG AGGGCTTTGC CTGCGGGCCA CGCCCTGGCT
CTGGATCTGC TGTTGCGTGA GGCTGGGCTG CGCATTGTAG ACTGGGGCCA GTTACCGCGC
GCACAGGCGG CCCTGCTGGA AGGCGAAAGC CTACAGGTCT GGAATCCCTG CGGGGCTGTG
CCCGCGCATC CTGCGCTGCA GGCCTTGCCC TGCCGTGATG AAAGCGTTGT TCCGCCCCTG
TCGCTGCTGG CCGGAAAGCG TGAAGCCGAT GCTCCGCCCC TTCTGGCCGC GCACTGGCGG
CGGCTTTCCC CTTGTGAAGG CCTCATGCGT GTGGCTGTAC CGCGTCTGTA TGTGGGGCTT
GGCTGCCGCA AAGGCCTTTC GCTGGGTGCT GCGCTCGAGG CTTTTGAAGA GCTTTTTGCA
ACGCACGATC TTGAGATGCA GGCCGTGGCC GCTCTGGGCA CGGTGACGGA AAAATTGCAG
GAACCCGCCC TGCAGGAACT TGCCTTTCGT CTTGGCGTGC CGCTCAAGGG ATTTGACGCT
GCCCGTTTGG CCCGTTGTCC GGTGCCGCAC CCATCAGCAG CGGCAGGGCG GCGTTTCGGG
CTGCCCCCTT TCAGCGTGTG CGAGGCCGCG GCCCTGCTGG CGGCCCGTAA GGATTCGGGC
TGCAGCGAGG CCCGCCTGCT GTTGCCCAAA ACCATTTTTC AGTCGCAGTT GACCGTAGCT
GTGGCCCTGG CCCTCGAGCA GGAGCCGGAC AAGGCCGCAA ACGGTGAAAA CAACAAAAAA
GAAGAACAGA TATGA
 
Protein sequence
MHPVFEKDSL ACYALSLSAL PLARRLKALL ASQPWTAPGG GRLEHCRIFT PQRFCPPDAQ 
PFTRLGDFLS TAYRQHGAHI FIGAAGIAVR ALAPLLTHKS QDPPVLVLDA AGNYVISLIS
GHWGGGNHLA RHVALLLRAT PVITTASDVS IEEGSLSATG HGHAEAEAAG RALPAGHALA
LDLLLREAGL RIVDWGQLPR AQAALLEGES LQVWNPCGAV PAHPALQALP CRDESVVPPL
SLLAGKREAD APPLLAAHWR RLSPCEGLMR VAVPRLYVGL GCRKGLSLGA ALEAFEELFA
THDLEMQAVA ALGTVTEKLQ EPALQELAFR LGVPLKGFDA ARLARCPVPH PSAAAGRRFG
LPPFSVCEAA ALLAARKDSG CSEARLLLPK TIFQSQLTVA VALALEQEPD KAANGENNKK
EEQI