Gene Ddes_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1999 
Symbol 
ID7285715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2410789 
End bp2411025 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content52% 
IMG OID643582821 
Productcarbon storage regulator, CsrA 
Protein accessionYP_002480573 
Protein GI220905261 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATAC TGACGCGCCG CCCGGGTGAA AGCCTGTATC TCGGCGAAAA CATACGCATA 
ACCGTTCTGG GTATGCAGGG CAAACAGGTC AAGCTTGGCC TTGAAGTGCC GGGCGACACA
ACCGTTTACC GCGAGGAAGT GTATAAACGG GTTGTGGAGG AAAACCGCCG CGCCCTTGAA
ACCAGTAACA ACGACCTTAT GGTGGCTGCT GAATTATGGC ACGAAACAAA GAAATAG
 
Protein sequence
MLILTRRPGE SLYLGENIRI TVLGMQGKQV KLGLEVPGDT TVYREEVYKR VVEENRRALE 
TSNNDLMVAA ELWHETKK