Gene Ddes_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1987 
Symbol 
ID7285703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2393318 
End bp2393986 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID643582809 
ProductSNARE associated Golgi protein 
Protein accessionYP_002480561 
Protein GI220905249 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.446526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGG TAAGTTATTT TATTGACTTT GTGCTGCACA TTGATGTGCA TCTTTTTGAA 
CTGGTTGAAC AGTATGGCCT TTGGATTTAC GCCATACTGT TTATTATTGT TTTTTGCGAA
ACAGGGCTTG TGGTCACTCC GTTTTTACCC GGTGATTCCC TGCTGTTTGC TGCAGGCGTG
GTGGCCGGAA CGGGCCTTAT GGGCTATGCT GAAGTGATGC TGGTGCTGCT GGCGGCGGGC
ATTCTGGGGG ATGCCGTCAA CTACTGCATT GGCCGCCATG TAGGCCCGGC CATCTTTTCG
CGGGACAGTC GCTTCATCAA GAAAGAACAT CTGCTCAAGG CCCACCATTT TTACGAACGC
CACGGCGGCA AGGCCATTGT GCTGGCGCGT TTTGTACCTA TTGTGCGCAC TTTTGCGCCT
TTTGTGGCGG GCATCGCCCT CATGCATCCC CGTACGTTTT TTTTCTTTAA CGTGACCGGG
TGCATCCTGT GGGTGGGCAG TCTCGTTTCC GCAGGGTTTT TTCTGGGCAA CCTTGAGTGG
GTGCGCCAGA ATTTCAGCAT TATCGTTTAT GGTATTGTTA TTGTATCCGT GCTGCCTGTG
GTCATCGAAG TGCTGCGCTC CCGTCTGGGC AAGGGGAAAG GCAGCTCCGG CGAAGGCGGC
GGGGAATAG
 
Protein sequence
MDMVSYFIDF VLHIDVHLFE LVEQYGLWIY AILFIIVFCE TGLVVTPFLP GDSLLFAAGV 
VAGTGLMGYA EVMLVLLAAG ILGDAVNYCI GRHVGPAIFS RDSRFIKKEH LLKAHHFYER
HGGKAIVLAR FVPIVRTFAP FVAGIALMHP RTFFFFNVTG CILWVGSLVS AGFFLGNLEW
VRQNFSIIVY GIVIVSVLPV VIEVLRSRLG KGKGSSGEGG GE