Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1987 |
Symbol | |
ID | 7285703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 2393318 |
End bp | 2393986 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643582809 |
Product | SNARE associated Golgi protein |
Protein accession | YP_002480561 |
Protein GI | 220905249 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.446526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATGG TAAGTTATTT TATTGACTTT GTGCTGCACA TTGATGTGCA TCTTTTTGAA CTGGTTGAAC AGTATGGCCT TTGGATTTAC GCCATACTGT TTATTATTGT TTTTTGCGAA ACAGGGCTTG TGGTCACTCC GTTTTTACCC GGTGATTCCC TGCTGTTTGC TGCAGGCGTG GTGGCCGGAA CGGGCCTTAT GGGCTATGCT GAAGTGATGC TGGTGCTGCT GGCGGCGGGC ATTCTGGGGG ATGCCGTCAA CTACTGCATT GGCCGCCATG TAGGCCCGGC CATCTTTTCG CGGGACAGTC GCTTCATCAA GAAAGAACAT CTGCTCAAGG CCCACCATTT TTACGAACGC CACGGCGGCA AGGCCATTGT GCTGGCGCGT TTTGTACCTA TTGTGCGCAC TTTTGCGCCT TTTGTGGCGG GCATCGCCCT CATGCATCCC CGTACGTTTT TTTTCTTTAA CGTGACCGGG TGCATCCTGT GGGTGGGCAG TCTCGTTTCC GCAGGGTTTT TTCTGGGCAA CCTTGAGTGG GTGCGCCAGA ATTTCAGCAT TATCGTTTAT GGTATTGTTA TTGTATCCGT GCTGCCTGTG GTCATCGAAG TGCTGCGCTC CCGTCTGGGC AAGGGGAAAG GCAGCTCCGG CGAAGGCGGC GGGGAATAG
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Protein sequence | MDMVSYFIDF VLHIDVHLFE LVEQYGLWIY AILFIIVFCE TGLVVTPFLP GDSLLFAAGV VAGTGLMGYA EVMLVLLAAG ILGDAVNYCI GRHVGPAIFS RDSRFIKKEH LLKAHHFYER HGGKAIVLAR FVPIVRTFAP FVAGIALMHP RTFFFFNVTG CILWVGSLVS AGFFLGNLEW VRQNFSIIVY GIVIVSVLPV VIEVLRSRLG KGKGSSGEGG GE
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