| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1976 |
|---|
| Symbol | |
|---|
| ID | 7285692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2378325 |
|---|
| End bp | 2379320 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643582798 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002480550 |
|---|
| Protein GI | 220905238 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0825703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGT TTCGTCTTCT TGTTCTGGCC GCTGCTCTTA TTTTGAGCTA TGCTGTGGCC
GCCGCGGCCG CTCCGGCCTG CACCAAGAAA ATCAACAGCT TTGACTTCGT TGTAGACTAT
TCCGGCTCCA TGATGATGAA AAATGCCCAG CTGAAGCAGG ACAAGATCAT CGTGGCCAAA
AATGTGCTGC AGCGCATCAA TGCCGCTATT CCCGCTCTGG ACTACAATGG TGGCCTGCAC
ACCATTTCGC CCAACGGCGT TATCGTTGCC CAGGGCCCCT GGGATCGCAA CACCATGGCT
GCCGGCATCA AAAAGCTGCG CTCCGACTTC CAGATCTTCG GTCGTATGAC CAGCATGGGC
ACCGGCCTGC AGGCTTATGA GCCTTTCCTC TCCAGCATGA AGCGCGACGC CGCCGTTATC
CTCGTGACCG ACGGCGACAA CAACCGTGGC GCCGATCTGG TGGAAGTGGC CCGTCAGATG
TATGCCAGCC AGCGTAACCT GGTTGTCCAC ATCATCTCCT TTGCCGACAG CAAGAACGGC
GAAGAAACCA TCAAGCAGGT TGCTGCCCTG AACCCCGCCA CCATCGTGGT GCGTGGTGAA
GAACTGGCCA CCAGCGATGC CGCTCTTGAG CGCTTCGTTC TGTCCGTGTT CTGCCAGGAT
GAAGACGTGA TTGTGCTGCG TGGCGTGCAC TTCGCTTTCA ACTCCTATGC CCTTGACGGT
AAGGCCATGG GCATCCTGAA CGAAGCCGCC GGTCTCATCA AGGCCAACCC CAACAAGCGC
GTTGTGCTCG CTGGCTGGAC CGACTGGATC GGCTCTGACG CCTACAACAT GAAGCTTTCG
CAGGAACGCG CCAACAGCGT GAAGAACTAT CTTGTGAAGC AGGGCATCCC CGCCAGCCGC
ATGACCGCCA TCGGTCGCGG CAAGTCCTTC AAGTACAACA ACGAAACCGC TGAAGGTCGC
GCCATGAACC GGCGCACCGA AATCTCCTTC GAATAA
|
|---|
| Protein sequence | MKSFRLLVLA AALILSYAVA AAAAPACTKK INSFDFVVDY SGSMMMKNAQ LKQDKIIVAK
NVLQRINAAI PALDYNGGLH TISPNGVIVA QGPWDRNTMA AGIKKLRSDF QIFGRMTSMG
TGLQAYEPFL SSMKRDAAVI LVTDGDNNRG ADLVEVARQM YASQRNLVVH IISFADSKNG
EETIKQVAAL NPATIVVRGE ELATSDAALE RFVLSVFCQD EDVIVLRGVH FAFNSYALDG
KAMGILNEAA GLIKANPNKR VVLAGWTDWI GSDAYNMKLS QERANSVKNY LVKQGIPASR
MTAIGRGKSF KYNNETAEGR AMNRRTEISF E
|
|---|
| |