| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1967 |
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| Symbol | |
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| ID | 7285683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 2372218 |
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| End bp | 2373864 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643582789 |
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| Product | YidC translocase/secretase |
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| Protein accession | YP_002480541 |
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| Protein GI | 220905229 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.537012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACG GTAAAAATCT TCTCATTGCC ATTGTTCTTT GTCTTATTGT CATTGTTGGC
TGGGGCTATC TGGCCGAGTA TATGGGCTGG GCCACCCGGC CTGCCCCGGT GGCGCAGCAA
AGCCAGGACC AGCAGGCCGC CCATCCGCAG CCGCAGGCCC AGACGCAGGC CGCGCCCGCA
CAGGCGAGCC TGCCCGTCTT TACGCCAGCG CCCGGGCGCG ACCTTACTGT GGACACCCCT
CTTTACGAAG CCGTGGTCTA CAGTGGCGGC GGCGCGCTGC GGTCGTTCAA GCTGAAAAAA
TACCAGGTAG GCCTTGCGGC CGACTCGCCC CAGGTGAACA TGGTTGATCC CAAGAGCGCC
CAGGTGGCTC CTCTGGGGCT TGTCATCAAC AGCCAGCCCT CATGGAGTAC GGGCCAGTGG
TCTATGGACA CCGGCGAGAA CGGGCTTGCT CTTGAACAGG GCCAGCAGGG AACGCTGCGC
CTCGTGGGCG AAGTGGACAA CCTGCGTGTG GTGCGCGAAA TGACCTTCAG CGCCACCAAC
TATCTTATCC GCGAAAAAAT CCGTGTGGTG AACCAGACCC AGCAGGCCCG CAGTGTGCGT
GTGAGCTATA CTGTGGCCGC TGATGCCAGC AATGCCGCCG GCGACCGCTA CGACGCCATG
CGCGTGGCGT GGGACAACGA CGGCAGCCTC AAGGAAGAAA GCTCGGCCAG TACCCTTGAA
AGCACCGGTG TGCAGGCTGT GGGTAAAATT TACTGGGCCG GGGCCATGAG CACGTATTTT
CTTGCGGCCG TGCTGCCCGG CGATGTGAAT AACGTGACCG TCAAGGGCGT AATGCAGCAG
AACGTGTACC GCACCGCCGT GGAAGAGCAG GAAACCCTGC TCGGCCCCGG ACAGGAAAAA
GAGCTTTCTG TTTCCTACTG GGTTGGTCCC AAGGTGCGCT CCGAACTGCA GGCCGTTTCG
CCCCAGCTTG CCAAGAGCGT TGATCTGGGC TTTTTCCACA TCATTGCCAA GGGCCTTCTG
TGGCTGCTGG AATTTTTCCA CAAGTATGTG CACAACTGGG GTCTGGCAAT CATTCTGCTG
ACCGTGCTCA TCAAGGCCGC CTTCTGGCCC CTGACGGCCA AGAGCTACGC CTCTATGGAA
AAGATGAAGA AGCTCCAGCC GCACATGATG GAGATTCGTG AAAAGTTCAA GGACAACAAG
GAACAGATGA ACAAAGAGGT CATGGCCCTC TACAAGACCT ATGGCGTCAA CCCCGCCAGC
GGCTGTGTGC CCATCCTCAT CCAGTTGCCC GTATTCTTTG GCCTGTACCA GGCCCTGCTC
ACATCCATCG AGCTGCGTCA TGCGCCCTTT ATCACCTATC TGCCCGGAAC GGACATCCTG
TGGCTGGCTG ACCTGTCCAC CAAGGATCCC CTGTACATTA CGCCCGTGAT CATGGGCCTG
ACCATGTTTT TGCAGCAGCG GATGAGCCCC CCGGCCACAG ATCCCACGCA GCAGAAGATC
ATGATGTTTC TTCCCCTTAT CTTTACGGCG CTTTTCCTGA ACTTCCCTTC GGGTCTGGTG
CTGTACTGGC TGGTCAACAA CGTGCTTTCC ATAGCCCAGC AGCAGATGAT GATCCGGAAG
TTCAAGGCCA ACGCCGCCGC GAAATAG
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| Protein sequence | MQDGKNLLIA IVLCLIVIVG WGYLAEYMGW ATRPAPVAQQ SQDQQAAHPQ PQAQTQAAPA
QASLPVFTPA PGRDLTVDTP LYEAVVYSGG GALRSFKLKK YQVGLAADSP QVNMVDPKSA
QVAPLGLVIN SQPSWSTGQW SMDTGENGLA LEQGQQGTLR LVGEVDNLRV VREMTFSATN
YLIREKIRVV NQTQQARSVR VSYTVAADAS NAAGDRYDAM RVAWDNDGSL KEESSASTLE
STGVQAVGKI YWAGAMSTYF LAAVLPGDVN NVTVKGVMQQ NVYRTAVEEQ ETLLGPGQEK
ELSVSYWVGP KVRSELQAVS PQLAKSVDLG FFHIIAKGLL WLLEFFHKYV HNWGLAIILL
TVLIKAAFWP LTAKSYASME KMKKLQPHMM EIREKFKDNK EQMNKEVMAL YKTYGVNPAS
GCVPILIQLP VFFGLYQALL TSIELRHAPF ITYLPGTDIL WLADLSTKDP LYITPVIMGL
TMFLQQRMSP PATDPTQQKI MMFLPLIFTA LFLNFPSGLV LYWLVNNVLS IAQQQMMIRK
FKANAAAK
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