Gene Ddes_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1964 
Symbol 
ID7285680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2367931 
End bp2368575 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID643582786 
Product3'-5' exonuclease 
Protein accessionYP_002480538 
Protein GI220905226 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGG ATGTTCTGCG CCGCCGCCTG AGCAGCGAAG AGATAAACGC CTTGCCCCTG 
TGTCACTACG AGGGGCCGGT GCATGTGGTA CGCAGCGAGG CGGACTGGCA GGCTGCGCTG
CCCCTGTTGC GTGAGGAAAG CATTCTGGGT TTTGATACCG AAACACGTCC GTCCTTCCGC
AAGGGCAGGC GCAATTCGCC CGCGCTCATC CAGCTGGCAA CGGCCCGGGC TGTCTATCTT
ATCCAGTTGT CCTGGTTGCC CTTCGGGCCG CACCTGGCGG ACCTGCTCGC CAATCCCGTG
CAGGTCAAGG CGGGCGTGGG CATTCGGGAT GACATGCGCG ACCTGGCAAA ACTGCACGAT
TTTGAGCCTG CGGGGCTGGT GGATCTCGGC GGCGTTGCCC GTGCGCACAA GCTGCCCAGC
CAGGGGTTGC GCACACTGGC GGCCAATTTT TTTGGCTGGC GCGTTTCCAA GGGGTCCCAG
TGCTCAAACT GGAGCCTGCC CGAGCTTAGC GCCCGGCAGA TCGCCTACGC CGCCACCGAT
GCCTGGATAG GCCGGCTTAT CTTTATCCGT ATGTGCGAGC TTGGCCTCAT TCCTGCTGCC
AGGCCTGCCA GTTGGCCTGC CGTGAGTTGC GGAGGCGGTG CGTGA
 
Protein sequence
MDMDVLRRRL SSEEINALPL CHYEGPVHVV RSEADWQAAL PLLREESILG FDTETRPSFR 
KGRRNSPALI QLATARAVYL IQLSWLPFGP HLADLLANPV QVKAGVGIRD DMRDLAKLHD
FEPAGLVDLG GVARAHKLPS QGLRTLAANF FGWRVSKGSQ CSNWSLPELS ARQIAYAATD
AWIGRLIFIR MCELGLIPAA RPASWPAVSC GGGA