Gene Ddes_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1950 
Symbol 
ID7285666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2350958 
End bp2351944 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content59% 
IMG OID643582772 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_002480524 
Protein GI220905212 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00010158 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATTC TGGTTTGCGG CGGAGCCGGA TATATCGGCT CCCACAATGT GCGTTCCCTG 
TTGGCGCGCG GTGAAGAAGT CGTTGTCATA GACAATTTTT TTACCGGTCA CCGCGCTTCA 
TTGCCTGACG GCGTTACCCT GTACGAAGGA GATATTCGCC AGGGCGAACT GCTGGACAGG 
ATTTTTTCCG AACACCGGGT GGATGCCGTG CTGCACTTTG CCGCCAGCTC GCTGGTGGGC 
GAGAGCATGG AACAGCCGCT GAAATATTTT CACAACAATG TCCACGGCAT GCAAAGCCTG 
CTTGAGGCTA TGGTGCGCAA CCATGTGGAC AAGATCGTAT TTTCCTCATC CGCGGCTGTT 
TACGGCGAAC AGGACAATGT ACCCATCAGC GAAGATGCGG CCCTCAGCCC CACCAATCCC 
TATGGCGAAA GCAAGCTCAT TATGGAGCGC ATGATGCACT GGGTGGGCAA GGCGCACGGC 
ATACGTTTTG TGAGCCTGCG CTACTTCAAC GTGGGAGGTG CCTGGCCCGG CGGTATTATT 
GGTGAAGACC ACAGGCCGGA AAGCCACCTC ATTCCTCTCA TCCTGCAGGT TCCGCTGGGC 
AGGCGCGAAA CCGTGACCAT CTTCGGCAAT GACTATCCCA CGCCCGACGG TACGTGTATT 
CGCGACTATA TCGGCGTTAT GGATCTGGCG GATGCACACA TGCGCGCCCT GGACTACCTG 
CGTGCGGGCG GCGGCAGCGA GGTATGCAAT CTTGGCAACG GCAAGGGTTT CAGCGTGCGC 
GAAATGGTCG CCGCTGCCTG CCGGGTGACA GGGCACGACA TCGGCGTGAC CATGGCCACC 
CGCCGTTATG GCGATCCGGC CCGGCTGGTG GCCTCGGCCG ACCGTGCCAG GGAACTGCTG 
GGGTGGGAAG CCAAGGCGGG TATTGACGAC ATCATTGCTT CCGCCTGGGA ATGGCATAAA 
AATCATCCTG ACGGCTTTTC CGCCTGA
 
Protein sequence
MPILVCGGAG YIGSHNVRSL LARGEEVVVI DNFFTGHRAS LPDGVTLYEG DIRQGELLDR 
IFSEHRVDAV LHFAASSLVG ESMEQPLKYF HNNVHGMQSL LEAMVRNHVD KIVFSSSAAV 
YGEQDNVPIS EDAALSPTNP YGESKLIMER MMHWVGKAHG IRFVSLRYFN VGGAWPGGII 
GEDHRPESHL IPLILQVPLG RRETVTIFGN DYPTPDGTCI RDYIGVMDLA DAHMRALDYL 
RAGGGSEVCN LGNGKGFSVR EMVAAACRVT GHDIGVTMAT RRYGDPARLV ASADRARELL 
GWEAKAGIDD IIASAWEWHK NHPDGFSA