Gene Ddes_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1948 
Symbol 
ID7285664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2348242 
End bp2349327 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID643582770 
ProductABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 
Protein accessionYP_002480522 
Protein GI220905210 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0176985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATA TAAAAAAATA CATTTCTCTG GCTGTCGCAG TGCTCATGCT GCTGCATCTG 
GCGGCATCCG GAGCCGCAGC CTCGCGCCTG GTGCGAGTGC CCACTGCCTG GATGGACGAA 
TTTGAAACAT TTCTTATCTG GTATGCCAAA GATAAGGGGT GGGACAGAGA AGCCGGGCTG 
GACATAGAAA TCAGACAGTA CGATTCCGGT GAAGAAATAC TTGATGCCCA GCCCACAGGG 
GCATGGGTCT ACGCCGGTAT GGGAACAGTC CCGGCTGTAA TGGGCAACCT GCACAATAAT 
GTCGTGGCCA TTGCCACAGG TGTGGACGAA TCCGCAGCCA ACGGCGTTGT GGTGCATGCC 
AACAGCCCCA TAGCGGCCGT CAGGGGCTGG AACAAGGAAT ACCCCGAAGT TCTCGGCAGC 
CCGGATACCG TGCGCGGTAA AACCTTTCTG GTTTCAGACC TCAGCTCCGC GCACTATGCG 
CTTTCGTCCT GGCTGCGCGT ACTGGGCCTT CAGGACAGCG ACGTCATCAT ACGCGACATG 
ATGCAGGGCC TTGTGGTCGC CAGTTTTGAA AACCATATCG GCGACGGCGT GGCCCTGTGG 
GCACCGCAGC TGTATCTGGC CCTGAACAAG GGCGGCGCTC TTGCCGCAAC CCTGAAGGAC 
TGCGGCAGGG ACAGCCCCAC CTATATTGTG GCCGACACGG CATATGCCAA TGAACACCCT 
GAAATCACTG TTAAATTCCT TACAGTCTAC TTCAGGGCCG TTGACGAGTA CCAGAGCAAA 
AATCCTGAAA GCTTTCTTCA GGATTATCGA CGTTTTTACC TGGAGTGGGC CGGAAAAGAC 
TTTGACGATG AGCTTATGCT GCGCGACATG AAAAGCCACA AGGTCTTCAA CCTGGCCGAG 
CAGCAGGCAG ATTTCGACAC CGCTACCGGG CGCAGTGAAG TGCAGAAAAA GCTGGAAGCC 
ATTGCCCGTT TCTTCGCCGA CCTGGGTCAC CTGGGCAAGG ACGAGGCGAT GTACGCCGGT 
ACGGCCAGCT ACGCCACAGA CAAATACATC AAGCTTGTGC CGCCCAACCT GAAGCTGAAA 
AAATAG
 
Protein sequence
MRNIKKYISL AVAVLMLLHL AASGAAASRL VRVPTAWMDE FETFLIWYAK DKGWDREAGL 
DIEIRQYDSG EEILDAQPTG AWVYAGMGTV PAVMGNLHNN VVAIATGVDE SAANGVVVHA 
NSPIAAVRGW NKEYPEVLGS PDTVRGKTFL VSDLSSAHYA LSSWLRVLGL QDSDVIIRDM 
MQGLVVASFE NHIGDGVALW APQLYLALNK GGALAATLKD CGRDSPTYIV ADTAYANEHP 
EITVKFLTVY FRAVDEYQSK NPESFLQDYR RFYLEWAGKD FDDELMLRDM KSHKVFNLAE 
QQADFDTATG RSEVQKKLEA IARFFADLGH LGKDEAMYAG TASYATDKYI KLVPPNLKLK 
K