| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1928 |
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| Symbol | secF |
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| ID | 7285644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 2321186 |
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| End bp | 2322289 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643582750 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002480502 |
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| Protein GI | 220905190 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA CCTTTGTCAA GCACGACACC AATATCGATT TCATTGGCAA GCGCTACTGG
GTGTACGGCA TTTCCGTAGC CCTTATTCTT ATAGGCATAG CTTCGGCCAT CTGGGGCAAT
GGCCTCAAGA TGGGCATCGA CTTTGCGGGC GGTGTTATCG TCCAGGTACA GTTTCAGGAG
CCCGTCGCCG ACGAAGCCCT GAAAAAGAGT CTGGATATTC CGGCGCTGCC CGGCATCAGC
ACCCAGCGCT TCGGTGAGGG CGGGCGGGAT TACCTGCTGC GCTTCAGCAG TGCGGAAAAC
GCCGATGCAA CGCAGTTACG CACCTCGGTT GTGGACGCGC TGGCGGCGAC CTTTCCCGGC
AATGCCGCCG AAATTGTGCG CCTTGAAATT GTCGGCCCCA AGGTGGGCGC AGACCTGACA
AACAAGGCCC TGAGCGCTCT TTATTACGCC ATTCTGCTCA TTGCGGTCTA TATTTCCGGC
CGCTTCGAGC AGCGTTGGAT GGCAGGCGTG ATCATGGCCG GAGCCTTGTG GGGCGGCATC
TATCTGGCGG GGCTTACCGG ACTCAGCATG GGGTGGCTTG TGATGCTGGC CCTGAGCATA
ACCGTGCTTG TCTGCTTTGT GTTGCGGCTG AACTTTGCCC TGGGGGCAGT GGTGGGGCTG
ATACATGACG TGGCCATCAC CGTAGGACTA CTGTCTTTGC TGGATGTGGA AATTGACCTT
AACGTCATGG CGGCCCTGAT GACCCTGGTG GGCTTTTCGC TCAACGACAC CATCATCATC
TACGACCGCC TGCGTGAAAA CCTGCGCGCC ACGCCAGAAC TGGACATGGC CCATCTTATC
AACAAGAGTG TCAACCAGAC GCTTTCACGT ACCATCCTGA CCAGTGGCAC GACCTTCCTG
TCTACCCTTG CGCTTTACCT GCTTGGTGGT GGCGTCATTC ATGACTTTGC GCTGACCATG
CTCATTGGTG TGGTGGTGGG CACGGCTTCG TCCATTTACG TGTCTTCCGC CATGTTGCTG
GCCCTGGGCG ATACGGATTT TTACGTAAGC CTGGTGCAGA AGAAAGACAA ATTCGAACGG
CCGGGAGAGC ACGGCGTGGT ATAG
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| Protein sequence | MSFTFVKHDT NIDFIGKRYW VYGISVALIL IGIASAIWGN GLKMGIDFAG GVIVQVQFQE
PVADEALKKS LDIPALPGIS TQRFGEGGRD YLLRFSSAEN ADATQLRTSV VDALAATFPG
NAAEIVRLEI VGPKVGADLT NKALSALYYA ILLIAVYISG RFEQRWMAGV IMAGALWGGI
YLAGLTGLSM GWLVMLALSI TVLVCFVLRL NFALGAVVGL IHDVAITVGL LSLLDVEIDL
NVMAALMTLV GFSLNDTIII YDRLRENLRA TPELDMAHLI NKSVNQTLSR TILTSGTTFL
STLALYLLGG GVIHDFALTM LIGVVVGTAS SIYVSSAMLL ALGDTDFYVS LVQKKDKFER
PGEHGVV
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