Gene Ddes_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1893 
Symbol 
ID7285608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2282374 
End bp2283342 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID643582714 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002480467 
Protein GI220905155 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000746649 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTC TGTTGCGCCT GGACAGCCTG TCCATCACAT TCCAGACAGA TGATGGCCCC 
CTGCCTGCCG TGCGGGATGT GAATCTCAGC CTGGAGCAGG GACGCATCAC CTGCCTTGTC 
GGCGAATCCG GCTGCGGCAA AAGCCTGACA GCCCGGGCCA TACTGCGCCT CATGCCGGAT 
AACGCCCGGC TGGACGGCAG CATCATGCTG CACGGGCAGA ACCTGCTGCA ACTGCCCCCC 
CGCGAAATGC GGGCCATACG GGGGCGGCGT GTGGGCATGG TTTTTCAGGA GCCGATGACA 
TCCCTCAATC CCGTGCTCAG GGTGGGGGAA CAGGTGGCCG AACCCTTGCG CCTGCACCTC 
GGCATGAACC GGACAAAAGC CCGTGAAGAA GCCGTGGCCC TGCTGGCAGA AGTGGGCATT 
CCTTCGCCCG AAAGCCGTTA TGCCGATTAT CCGCATCAGC TTTCCGGCGG CATGCGACAA 
AGGGTGATGA TCGCCATGGC CCTTGCCTGC CGCCCGGACC TGCTGCTGGC AGACGAGCCG 
ACCACAGCGT TGGACGCCAC CATCCAGGGG CAGATACTGC GCCTTATGCG TTCCCGCAGC 
CAGCAGCGCG GCATGGCGGT GCTGCTCATC ACGCATGACC TGGGCGTAGC CGCCCAGATG 
GCCCACAACG TGGGCGTCAT GTATGCCGGA CGGCTTGTGG AACACGCCCC GGCGGAGGAG 
CTTTTTTCCC GCCCGCTGCA CCCCTACACC CAGGGCCTGC TTCAGGCCGC CCCCAGCGCG 
CTTTCCCGCG GGCTCAGCCG CCTGCCCACC ATCCCGGGCA GCGTGCCTAC CCTGCGCGCC 
ATGCCTCAGG GCTGCCCTTT TCATCCCCGT TGCGGCAAAG CCATGCCCAT ATGCAGCGAA 
AAAATGCCCC CGGACTTCGT TAGGGGTGAA CGCCGGGCGG TCTGCTGGCT ACACGAAAAT 
CAGGCATAA
 
Protein sequence
MQPLLRLDSL SITFQTDDGP LPAVRDVNLS LEQGRITCLV GESGCGKSLT ARAILRLMPD 
NARLDGSIML HGQNLLQLPP REMRAIRGRR VGMVFQEPMT SLNPVLRVGE QVAEPLRLHL 
GMNRTKAREE AVALLAEVGI PSPESRYADY PHQLSGGMRQ RVMIAMALAC RPDLLLADEP 
TTALDATIQG QILRLMRSRS QQRGMAVLLI THDLGVAAQM AHNVGVMYAG RLVEHAPAEE 
LFSRPLHPYT QGLLQAAPSA LSRGLSRLPT IPGSVPTLRA MPQGCPFHPR CGKAMPICSE 
KMPPDFVRGE RRAVCWLHEN QA