Gene Ddes_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1891 
Symbol 
ID7285606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2280488 
End bp2281393 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID643582712 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002480465 
Protein GI220905153 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000802295 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA ATGTAACGGG CTATGCCTCC GCCCTTCTGG CCGTCATCAT CTGGTCTGGA 
AACTTTGTGG TTGCCCGGGC AGTGGCGGGG CTTATCCCCC CCTGGCAGTG CAACTTCTGG
CGCTGGCTCA TCGCCCTGAT CATTCTGCTG CCCTTTGCCG GAAAGCACTG GCGCACTGAC
TGGCCCGCCA TCAAAAAAAA CTGGCGCGGG CTTTCTCTTT TGGGCATTCT TGGCGTCACC
CTGCTCAATA CCTTTCTGTA CAAGGCCGGG CAGACCACGG AAAGCATCAA TATGGCACTG
CTGGTTCCCA CGGCCCCGGT GGTTATCCTG ATACTTTCAC GCGTGCTCTA CAACGAACCG
ATTTCTCCGC GCCGCATGGC GGGCGTGCTC GTGGTCCTTG CAGGGGTAGC CATACTGGTC
AGCCGCGGCC AATGGGACCG GCTGGCCCAC CTGCGCTTCA ACGAAGGAGA TCTGTGGGCC
CTGGGCGGCG TACTGTGCTT CGGCCTCTAT TCCCTGTTCA TACGCCAGCG CAGTCCCGAC
ATCTCGCCTA TGGGCTTCAG CATAGCCACC TTTGCCCTGG GTTTGCTGTA CTCCCTGCCC
TTTACCGCCA TTGAAGCCTT TATGCTGCCC CTGCCGCAGA TGTCCGCCAC GCTGGTCATA
AGCGTGCTTT ACGCAGGCAT CGGCTGCTCA GCCCTGTCGT TCTGGCTGTG GACCGTTGCT
GTGGACCGTA TCGGCCCGGT ACGGGCGGGC ATGGTCTATT ACAGTCTGCC TGTTTTCGCA
GGCATTGCCG CAAGCATTGT GCTGCACGAG CGCGTGGCCC CGGCCCAGCT GGCAGGCGGC
GCACTGGTTA TCAGCGGCAT CATCATCGCC ACGCTGGTTC TGCCCCAGCA CAGGGCAAAA
GCCTGA
 
Protein sequence
MQKNVTGYAS ALLAVIIWSG NFVVARAVAG LIPPWQCNFW RWLIALIILL PFAGKHWRTD 
WPAIKKNWRG LSLLGILGVT LLNTFLYKAG QTTESINMAL LVPTAPVVIL ILSRVLYNEP
ISPRRMAGVL VVLAGVAILV SRGQWDRLAH LRFNEGDLWA LGGVLCFGLY SLFIRQRSPD
ISPMGFSIAT FALGLLYSLP FTAIEAFMLP LPQMSATLVI SVLYAGIGCS ALSFWLWTVA
VDRIGPVRAG MVYYSLPVFA GIAASIVLHE RVAPAQLAGG ALVISGIIIA TLVLPQHRAK
A