Gene Ddes_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1887 
Symbol 
ID7285602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2275057 
End bp2276217 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content61% 
IMG OID643582708 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002480461 
Protein GI220905149 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.796318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC ATATCCAGGT CGTACCCGAC AAATGCCGCG CCTGTCGCCG CTGTGAAGTG 
GCCTGTATTG CCGCCCACCA CGGCATGAGT TTCAAAGAGG CCATGAAGCA TCGCGATGAA
CTGGTATCGC GCGTGCAGGT GGTCAAGGCT GAAGGCTTCA AAACCACCGT GCGCTGTCAC
CAGTGCCCCC ATGCTCCCTG CGTCAATGTG TGCCCCACCG GGGCGCTGCA ACAGGATGAG
CAGGGGCGCA TCATCATGCG CGTCCAGTAT TGCGTGGCCT GCAAAATGTG TATGGCGGCC
TGCCCCTACG GAACCATCAC TATGGAAACC ATCGGCATGC CCACGGTAGA CGGCGAAGAC
GGCGAAACCA TCGCCCAGCG CGCCCGCCGC GAAGTAGCCG TGCGTTGCGA CATGTGCCGC
GCGTGGCGGA TGGAAAACGG CAAACGCATT ACCGCCTGCA TGGAAGCCTG CCCCGCCCAC
GCCCTCTCGC TGGTGCTGGC CGACGGCACG GTTGTGGAAG CACCCAAGCC GGAAAAGAAG
GCTGTGGCCG CCGCAGCCAG ACCAGAGGCT CCCAAGGCTG AAACAACCCC GGAAAACGGC
ACACAAGCTG CCGCAGGCAC CGAAACCGCA GCCGCAGAAA AAAGCATATC TGCCGCCAGT
GAGCAAGAAA TTTCCGTAAC ATCGGCCACG CCCGCTCCCC AGACGGCATC CGCCGCTGCA
GCCGCACCCG TGGCGGAGAA AAAAGATCCT GCGCCCGAAG CCGAAAAGGC AGACGCCGCC
GAAGCTGAAA AAATATCCGT CACCGAAACC GCCCCTACTG CAAAGGCAAA GGCCGATGAG
CCTTCCGCCG GGCAGGTACA GGCGGATGAA ACTCCCGCTG CGGAAAATGC AGAAGATGCC
GCGTTCTCTC CCGCCGCAAC GGCCAAAGAC AAACCCGTAA GCGCTCCGAA AACCGCTCCC
CAGGCCCCTG CCGAGCCTAC TGGATCCCAT GCTGCCGCCA AGGTTGAAGA AGCCCAGCAA
ACTGTAAAAT CCCCGGCCCC CGCGACAGCG GAAAAAAAGC CCGCAGCCGT AACAACGGTT
GAAAAAAAAT CCGCAGCCGC AGCAAAAAAA CCTGCGGCGA AGGGCAGCAA AAAAACGGCA
AAAAAGAGCG GCAAAAAATA G
 
Protein sequence
MTEHIQVVPD KCRACRRCEV ACIAAHHGMS FKEAMKHRDE LVSRVQVVKA EGFKTTVRCH 
QCPHAPCVNV CPTGALQQDE QGRIIMRVQY CVACKMCMAA CPYGTITMET IGMPTVDGED
GETIAQRARR EVAVRCDMCR AWRMENGKRI TACMEACPAH ALSLVLADGT VVEAPKPEKK
AVAAAARPEA PKAETTPENG TQAAAGTETA AAEKSISAAS EQEISVTSAT PAPQTASAAA
AAPVAEKKDP APEAEKADAA EAEKISVTET APTAKAKADE PSAGQVQADE TPAAENAEDA
AFSPAATAKD KPVSAPKTAP QAPAEPTGSH AAAKVEEAQQ TVKSPAPATA EKKPAAVTTV
EKKSAAAAKK PAAKGSKKTA KKSGKK