Gene Ddes_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1885 
Symbol 
ID7285600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2273450 
End bp2274532 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID643582706 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_002480459 
Protein GI220905147 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCA CCTTCACCAT GCCTCTCGGG CCGGTACACG TGGCCCTTGA GGAACCGGTA 
TACTTCCACC TGACGGTGGA CGGTGAAACC GTGCGTCACG TGGAACTGAC CTCCGGCCAT
GTGCACCGCG GCATGGAGGC CATGGCCACC CAGCGCAACC TGGTCAAAAA CGTCACGCTT
ACCGAACGCG TGTGCTCCCT GTGCTCCAAC AGCCACTCCT TCACCTACAG CATGGTGGTG
GAAAACGTGC TGGGCATCAC CATCCCCGAC CGCGCGCGCT ATTTGCGCGT AGTGGCGGAA
GAAATCAAGC GTATCGCCTC GCACCTGTTC AACACTGCCA TTCAGGCGCA CATCATCGGC
TTCAAGTCGC TGTTCATGCA CGTCATGGAA GTGCGTGAAA TGATGCAGGA CCTGAAAGAA
ACCGTTTACG GCAACCGCAT GAACCTGGCT GCGAACTGCA TTGGCGGCGT AAAATACAAT
GTCAATGCGG AGCTGCTGGA CTACATGCGC AAAATGCTGG ACAAGGTGGA GCCGCAGGTG
GACGAAATCC GCGAGATTTA CGACACCAAC AGCATGGTTC TGGCCCGTAC CAAGGGCCTT
GGCGTGCTGC CCAAGGAAGA CGCCATCCGC CTTGGCGTGG TTGGCCCTGT GGCGCGCGGC
TCCGGTCTGC AGCTGGACGT GCGCAAGGAC TCGCCTTACG CCGCCTATCC TGATGTGGAA
TTTAAAACCA TTGTGGAACA GAGCGGCTGC ATCCACGCCC GCACTATGGT GCGCATGCAC
GAAGTGCTCG AATCCTTCAG CATCATCCGC CAGTGCATCG CGCGCATGCC CGAAGGCGAG
GTAACGGCCC CCATGCGCCA GATACGCACG GCCGAGGCCT GCGCCCGCTC TGAAGCGCCG
CGCGGCGAGG TTTTCTACTA TATCCGCACC AATGAGACGG ACATACCCTC GCGCCTCAAG
TGGCGTGTGC CTTCCTACAT GAACTGGGAG GCTCTGGGCG TGATGATGCG TGACTGCAAG
GTGGCCGATG TGGCCCTGAT CACCAACAGT ATCGACCCCT GCGTGTCCTG CACGGAACGC
TAG
 
Protein sequence
MTSTFTMPLG PVHVALEEPV YFHLTVDGET VRHVELTSGH VHRGMEAMAT QRNLVKNVTL 
TERVCSLCSN SHSFTYSMVV ENVLGITIPD RARYLRVVAE EIKRIASHLF NTAIQAHIIG
FKSLFMHVME VREMMQDLKE TVYGNRMNLA ANCIGGVKYN VNAELLDYMR KMLDKVEPQV
DEIREIYDTN SMVLARTKGL GVLPKEDAIR LGVVGPVARG SGLQLDVRKD SPYAAYPDVE
FKTIVEQSGC IHARTMVRMH EVLESFSIIR QCIARMPEGE VTAPMRQIRT AEACARSEAP
RGEVFYYIRT NETDIPSRLK WRVPSYMNWE ALGVMMRDCK VADVALITNS IDPCVSCTER