Gene Ddes_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1883 
Symbol 
ID7285598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2272316 
End bp2272894 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID643582704 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002480457 
Protein GI220905145 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.888786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCT TTCTTAAAGT TTTATTCCGC AACCTGCTTG AAGGCCCCAG CACCGATCCT 
TTTCCTCTGG GCGAAACCTT CACCCCCGAG CGCCTGCGCG GCAGGGCCGT TGTTGACCCG
GACCTGTGCA TGGGCTGCGG CATCTGCCGT CACTCCTGCG CTGCGGGGGC CATCCATATC
GGCCAGTTGC CCGACAGTTC AGGCTTTACC ATAACCATCT GGCAAAACTC GTGCTGCCTG
TGTGCCTCGT GCCGCCACTA CTGCCCCACC GGGGCCATGA GCATCAGCAC AGACTGGCAT
TCGGCGCACG CCCAGACCGA AAAATATAAA AGGCTTGAGC AGCACACCAT CAAGTATGAA
CCGTGCGCCC AGTGCGGCGA GCTTATGCGG CCCATACCCA AGGCACTGGC TGAAAAGCTT
TATGCCTGGA ACGACGAGAT CGACCCCGAG CTGACACGCA GGCTCTGTCC CAAATGCCGT
CAGATTGAAG ACGCCAAGCG CAACGCCTGC CTGCTGCCGG AACCGGGCGA AACCCCGGTG
GAAAAGGCCG TAACCTCGGC GGCTCCCACA AAAGATTAG
 
Protein sequence
MAGFLKVLFR NLLEGPSTDP FPLGETFTPE RLRGRAVVDP DLCMGCGICR HSCAAGAIHI 
GQLPDSSGFT ITIWQNSCCL CASCRHYCPT GAMSISTDWH SAHAQTEKYK RLEQHTIKYE
PCAQCGELMR PIPKALAEKL YAWNDEIDPE LTRRLCPKCR QIEDAKRNAC LLPEPGETPV
EKAVTSAAPT KD