Gene Ddes_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1881 
Symbol 
ID7285596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2270883 
End bp2271854 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content59% 
IMG OID643582702 
Productrespiratory-chain NADH dehydrogenase subunit 1 
Protein accessionYP_002480455 
Protein GI220905143 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.417671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA CCCTGCTTGC CATACTGCAT ATGTGCGTCT TCCCCGGCGG GGCCTTTGCC 
CTCATGGTGG CCATGTTCTT CAAAGGACTG GACCGCCGGG TAGAAGCCCG CCTGCAACGC
CGCGTGGGGC CGCCCCTGGT GCAGCCCTGG CTGGACATTG CAAAGCTGCT GACCAAGGAA
ACCATGATTC CCCGTACCGC CTGCCGCCCG GCATTTTTGC TGGCCCCGGT TTTCGGCTTC
ACGGGCATGG CCGTTTGTGC CGCCTTTATC CCCATCTCGG GCGTATATAA CGGCCTGTTC
AACATGGGTG ACCTGCTGGT GATCTTTTAC CTGCTGCCCA TTCCGGCCAT GGCCATCATG
CTTGGCGGCT CGGCCTCAAG CTCGCCCTTC GGCGCAGTGG GCTTTTCACG CGAAATGACC
CTTATGTTCG CCTATGAAAC GCCTCTGCTC ATGATTCTGC TGGCTGTAGC CATGCTGACA
GGCAAAACCC TTGCGGGCGG AGCCTGGGGC GCGGAATTCT CGCTTTACAA AATCGTGGCC
CTGCAGCAGC AGGCCGGATC TTTCGGCTTT AACCCGTCCA TGATACCGGC GTTTCTGGCC
TATCTGATCT TTCTGCCCGG CACTATGGGG GTTGTGCCCT TTGACATCCC CGAGGCCGAA
ACAGAAATCA TCGAAGGCCC GCTGCTGGAA TACGGCGGCC CGCTGCTGGC GCTTTTTCAG
ATAACGTCGG CTCTCAAAAC CTTCGTTGTT CTGGGGCTGG GGGTTGCGCT TTTCTTTCCC
GGCACCATAT CTGAATGGTG GCCCATCAAT CTCTTGTGGT TCCTGTTCAA GTGTTTCGCG
CTCATGCTGG TTTCGCTCAC CCTGGTCAAG TCGGCCACCG GGCGTTTCCG CATTGACCAG
GCGTTTCGCT TTTATGTGAC TGTGCCCACA GCCCTTGCGC TGTGCAGCCT GATACTGGTC
TGGGTGATGT AA
 
Protein sequence
MSDTLLAILH MCVFPGGAFA LMVAMFFKGL DRRVEARLQR RVGPPLVQPW LDIAKLLTKE 
TMIPRTACRP AFLLAPVFGF TGMAVCAAFI PISGVYNGLF NMGDLLVIFY LLPIPAMAIM
LGGSASSSPF GAVGFSREMT LMFAYETPLL MILLAVAMLT GKTLAGGAWG AEFSLYKIVA
LQQQAGSFGF NPSMIPAFLA YLIFLPGTMG VVPFDIPEAE TEIIEGPLLE YGGPLLALFQ
ITSALKTFVV LGLGVALFFP GTISEWWPIN LLWFLFKCFA LMLVSLTLVK SATGRFRIDQ
AFRFYVTVPT ALALCSLILV WVM