| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1880 |
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| Symbol | |
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| ID | 7285595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 2267149 |
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| End bp | 2270886 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643582701 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_002480454 |
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| Protein GI | 220905142 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.374238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAT CATTGTTCTC GGCTGGCGGC CTGCTGGTGC CGCTTCTGGT GGGCATGGCC
CTTATGCTGT ATGCCGCGGC TCAGGCCGTG CGCCAGCGCA AGGACCCGCG ACGCCTGATC
CTCTGGGGCG CCCTGCATGA TGCAGGCATT GTTTGCCTGG GGCTTGGGGC GGGAACCGCC
GCCGGCGCCA CCGGCTTATG GCTCTTCATA CTCTTCCAGG CAGCCGCGCG CGGACTGGCC
TGGACGGCTC TGGCCCGGCT CTCTTCGGCC TGCCATACAG GCACTGCCTG TAGCCGCGGG
TCCGTCACAC TGGCCGACCT CGGCGGCTCC GGGCAGCGCC ACCCCTGGAC GGCGGCACTA
TTCGCCCTGG GCCTGCTGGC CTCAGTGGGC GGCTCGCCGT TTCTCTTGCC TGAAGCCCGC
CTTTTCATCA ATGCGGCGGT GCTTGAAGCC ATACCCGGCG GGCTTGTGGC CCTGCTGGTC
ATGGCCCTGG CCACCACCAT TTTCATCTGG CTGTATGTTG ACGCCGTGCG CCGCGTGGCG
CTGGAAGATG CGTCGGAAGA CACGCACACG GCCCTTGGTC CCATGCGCGG CAGCAGCCTG
CCGGTGCTGG CCCTGGCTGC GGCTGTGGCC CTCATGGGCC TTCTGCGCGG TCCGCTGACC
GGGCTTATCG GCGGCCAGTA CGGATTTGCC GCGCCCCATG CGGCCGTGCA TCCGGCCTAC
TGGTGCTATT ACCTCGGCGC CTTTATCGCC GGGGGGGCTT TTCTGGCCCG CCTGCGGCAG
GCGCCAGTGG TGGGCACGGC ATTCGCGGCC CTGGCCTTTG TTCTGGCCCT TGCCATTGAA
GCCGGCCCCA CAGCCAAACT GTTTTTGATC ATGACCAGCC TGGTGGCCCT GGTGGTCTGC
GTATACTCGC AGGGTTACAT CCACGGGCGC CATCAGGGAC GCTACTGGTT CTTCCTGCTG
CTCACCTTCG CCTCGCTGGC CGGCATAGTC TCAAGCTCTG ACGCTCCGGG CCTGTATGGT
TACTGGGAGC TCATGACCTT CGCCTCCTAC TTTCTGGTGG TACACGAAGG ACGCCGCAGC
GCGTTTGACG CCGGCCTCAA ATACTACATA ATGTGCGCGG GCGGCGCGCT TTTCATGCTG
CCCGGCCTGC TCATGCTCGG TCAGGGTTTT GTACCCACGC CGGTGGTGCA GGCAGCTTTT
GTGCTCTGCC TGGCGGGGTT TGGCGTCAAG GCCGGCCTTG TGCCTCTGCA TTCCTGGTTG
CCCGACGCCC ACCCGGCCGC GCCTTCTTCG GTTTCGGCCC CCCTGTCGGG CATCATAACC
AAGATGGGCA TCTTCGGCAT TGTGGCCGTG CTGCTCATGC GGCCCATGGT CAGCAGCCTG
CCGGGCCTGT TCGGGCTTTC CTGGCTCGGC ACGGGCCTGG TCTTCACGGG TGCCGCCACC
CTCATCCTGG GCGAGGTCAT GGCCTTGCGG CAGGACGACA TCAAGCGCAT GCTGGCTTAT
TCCACACTGG GACAGATCGG TGAAATCGCG CTGGTGCTCG GCATCGGCAC GTGGCTTTCC
ACAACCGGCG CGCTGTGGCA CATGTTCAAC CACGCCATAA TGAAGGACCT GCTCTTCCTC
GGCGCAGGCG CGCTCATCCT GCGCAGCGGC AGCCGCAAAC TTGCCGACCT GCGCGGCCTG
GGCCGCCAGA TGCCCTTCAC CGTGGCCTGC ATGGGCATTG GCCTTGTGAG CATTATGGGG
CTGCCGCCGT TTGGTGCGTT TTACAGCAAA TTCCTGATGA TACAGGCCGC CACAGAGGCC
GGGCAACTCT GGCTGGCCGC CCTTATTCTC GGCGGATCAC TGGTGGGCCT TGTGTACTAC
ACACGCATCC TCAAGACCCT GGTCTTTGAG GAACGCCCCG ACTACCTGCC CAAAGCCACC
GAAGCGCCCC TGACCATGCG TCTCGGCATG GGAGCACTTG CCGCCCTGTG TCTGCTGCTT
GGCCTTGCGC CGCAACTGCC CATGCAGATT GTGGTTCCCG TAGCCAGCCT TGCCTTCGTA
CCCAACCCCT CCGACACATC GGTGCTGCTG GCCATGAACG TGAGCTGGCC CATATATGTG
GTCGTCCCCG TATTTGGCGC GCTTTTGCCT GCCCTATTCC ACAAGAACCG CATCATGGCG
GGCAAAACCA GCGTGGGAGT ACTGCTTGCC ACCGCCCTGC TGGTGATCCT GTTCGGGCGC
GGTCTGGACA CGCTCTCTTT CTGCTTTGCC CTTATCGTCC CCCTGCTTGG CGCGGTCAAT
ATGGCCTATG CACTGGGCTA TATGGAACAC AGCCATCGGC AGTGGCGCTT CTACTGCGCC
TTTACCGCCA TGTGCGGCGG TCTGGTGGGC ATGGCGGCCA GCCAGTACCT GCTGAGCTTC
TTCCTGTTCT GGGAAATCAT GAGTTCGTGG ACGCTGTACC TGGCCATTGC CCACGAAGGC
GACAAGGCAT CCCTGCGTGA GGCCTTCAAA TACTTTATCT TCAACGTGTT CGGCGCGGGC
TTCATCTTTG TGGGCCTGTG CGTTATCGGA CCCTTTACCC CCTTCAGCAC CCTGCTGCTG
GAAGGCATGG CTCCCAGCCT GTCGCCGGGC GCGGCCTGGC TTGGCATGGC CCTGCTGGCC
GCCGGTTTTG TCATGAAGGC CGCCCAGCTG CCGTTCCGCA TTGACTGGCA GATGCACCCG
GCCCTTGCCC CGACCCCCGT GTCCGGCTAC ATCTCTTCGG TTCTGCTGAA GAGCGCCATA
CTGGGGCTTA TCAAGCTGTT CATGCTGCTC GGCGGCGGTT TCGCCCTCGC CGGGGTTCTG
GGCGGGTTTG AACAAGGCTC CATCAGCGTG GCCGTCATGT GGATAGGCGG TATCACCATC
ATCATGGCCG CCCTTCAGGC GCTGCGCAGC AACGGCATCA AGCTGATATT CATCTACTCG
ACGGTCAGCC AGCTCGGCTA CATGGTCCTC GCCGTGGCAG CAGGCGGCGC GCTTGGCTAC
GCGGGCGGCA TGTTGCACGT CATCAACCAC GTTTTCTTCA AAGATCTGCT CTTCCTTGTC
TGCGGCGCAG TCATGTTTGC CAGCCACAAG GAAACACTGG ACGACCTGGG CGGTATCGGG
CGCAAGATGC CCTTTACCCT GGCCATGTTC GCCATTGCCG GGCTTTCGGT GGTGGGTGTT
CCCCCCACCA GCGGCTTCTC GTCCAAATGG CTTATCTACC ATGCCCTCAT GGAAGCCGGT
CAGCCCTTCC TGGCGCTGCT TTCCCTCATC GGCAGCGTGC TGACCATGGC CTATATAGCC
AAGTTCCTGC ACGCGGCCTT TCTGGGCCAG CCCGCCCGCG ACCTTGACGA AATCAGGGAA
GTGCCGCGCA TCATGCGTGT ACCCATGGGC ATTCTGGCCG CAGGTTGTCT GCTTACGGGC
ATATTCCCCG GCCTTGCACT CGGCCCCATC AATTCGGTGC TGTTTGAATA CGGCTTCATG
CCTCTGAACG TGGGCCTTTC CGGCGTACTT TCAGGCGCGG GAGCCTGGAA CGCCACGGGC
ATGTTCGTGA TGATGGCCCT GGCTTTCGCG GGCGGCTGCT GGTTTGTGAA GCGCTTTACC
CGCCTGCGCG AAATCGACGT GCACACCTGC GGCCTGCCGC CCGAAACGGC CACCAGCCGC
ATGACGCCTT CCAGCATTTA CGGCGGCCTC ACGCGCCTTC TCGGCAGTGA GCGCGCGCCC
AAGGAGAACC GCTCATGA
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| Protein sequence | MTESLFSAGG LLVPLLVGMA LMLYAAAQAV RQRKDPRRLI LWGALHDAGI VCLGLGAGTA
AGATGLWLFI LFQAAARGLA WTALARLSSA CHTGTACSRG SVTLADLGGS GQRHPWTAAL
FALGLLASVG GSPFLLPEAR LFINAAVLEA IPGGLVALLV MALATTIFIW LYVDAVRRVA
LEDASEDTHT ALGPMRGSSL PVLALAAAVA LMGLLRGPLT GLIGGQYGFA APHAAVHPAY
WCYYLGAFIA GGAFLARLRQ APVVGTAFAA LAFVLALAIE AGPTAKLFLI MTSLVALVVC
VYSQGYIHGR HQGRYWFFLL LTFASLAGIV SSSDAPGLYG YWELMTFASY FLVVHEGRRS
AFDAGLKYYI MCAGGALFML PGLLMLGQGF VPTPVVQAAF VLCLAGFGVK AGLVPLHSWL
PDAHPAAPSS VSAPLSGIIT KMGIFGIVAV LLMRPMVSSL PGLFGLSWLG TGLVFTGAAT
LILGEVMALR QDDIKRMLAY STLGQIGEIA LVLGIGTWLS TTGALWHMFN HAIMKDLLFL
GAGALILRSG SRKLADLRGL GRQMPFTVAC MGIGLVSIMG LPPFGAFYSK FLMIQAATEA
GQLWLAALIL GGSLVGLVYY TRILKTLVFE ERPDYLPKAT EAPLTMRLGM GALAALCLLL
GLAPQLPMQI VVPVASLAFV PNPSDTSVLL AMNVSWPIYV VVPVFGALLP ALFHKNRIMA
GKTSVGVLLA TALLVILFGR GLDTLSFCFA LIVPLLGAVN MAYALGYMEH SHRQWRFYCA
FTAMCGGLVG MAASQYLLSF FLFWEIMSSW TLYLAIAHEG DKASLREAFK YFIFNVFGAG
FIFVGLCVIG PFTPFSTLLL EGMAPSLSPG AAWLGMALLA AGFVMKAAQL PFRIDWQMHP
ALAPTPVSGY ISSVLLKSAI LGLIKLFMLL GGGFALAGVL GGFEQGSISV AVMWIGGITI
IMAALQALRS NGIKLIFIYS TVSQLGYMVL AVAAGGALGY AGGMLHVINH VFFKDLLFLV
CGAVMFASHK ETLDDLGGIG RKMPFTLAMF AIAGLSVVGV PPTSGFSSKW LIYHALMEAG
QPFLALLSLI GSVLTMAYIA KFLHAAFLGQ PARDLDEIRE VPRIMRVPMG ILAAGCLLTG
IFPGLALGPI NSVLFEYGFM PLNVGLSGVL SGAGAWNATG MFVMMALAFA GGCWFVKRFT
RLREIDVHTC GLPPETATSR MTPSSIYGGL TRLLGSERAP KENRS
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