Gene Ddes_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1874 
Symbol 
ID7285589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2257861 
End bp2259159 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content66% 
IMG OID643582695 
Productamidohydrolase 
Protein accessionYP_002480448 
Protein GI220905136 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCA AGGGGCCTTC AGATTTACCT ACAGGTTCAC GAGCGGCCTT CGCGCAACCT 
CAAAACGGAA ACGCCGACGG CCGTGCGGAT CAGTTCGCCG GGCCTGCGCT GGCGATCAGG
GCCAGAAGCA TTGTGACCCT GGCGGGCGAA GGCCCGTCCA GAGGGGCGCG GCTGTTTGCG
CCCCTGAAAA AGATCGACAA TGCCGTGCTT ATCGTGCGTG GCGGCCTGGT GGAAGAGGTG
CGCCCCTGGT CTGCCGCTGC GGCGCCCGCC GGAGCTGTCG TGCGCGATGT GGGCGCTGTG
TGCCTGGCCC CGGCCTGCGT CAACGCGCAC ACGCATCTTG AACTCTCGCA TCTTGCCGGG
CGCACGGTAT GGGGCAAAGG TTTCACCGCA TGGCTGCAAA GCCTCGTTCC TTTGCTGCCT
GAAGCCCCCG ATGCGCAGGC TGTGGAAAAT GCCTGCGCTC ATCTGGCCGG AACCGGCACC
CTGTACGCGG GTAATATTAC CGGCTCGTTG CCGGGCGGCA CGCTTCTGGC TGACGCCGCC
TGCCGGGAAA CGGGCATTGC CGCAAGCCAT TTTTGCGAAT GGTTCGGTTT TGGCGCGCCC
TTTGCCGACG GTATCCGCCC CTGGCCGCCC CGCTGCCGCC AGGTTCTGCA GGACGATCCC
TTTCTGGCAG CCCGATGCGC CCCCGGCGGG CATGCCCTGT ATTCCACCGG GGCTGACATC
TTGACTGCCG CCAGGCAGGA CTGCGCCCGC ATGGGCCGTA TTTTCAGCTT TCATCTGGCG
GAATCCCCCG ATGAGACGCA GATGCTGGTC ACGGGTGACG GCCCCTTGCG CCATTTCTAC
GAAAAGGCGG TCCTGCCCGA AGACTGGCAG GCCCCCGGCC TGCGCCCCCT GGCCTACGCC
GTCAAGCTGG GGCTTCTCGG CACGGGTACC CTTGCTGTAC ACGGTACACA GCTTGACGCC
CAGGAAGTGG AGGTGCTGGC CGCCAGCGGC ACGGCCCTGT GCCTGTGCCC GCGCTCCAAC
CGCAATCTTG ACCTTGGCGT GCCGCCGGTG CGCGACCTGC TTGAAAGCGG CTGCCTGCTC
TGCCTCGGTA CGGACGGTCT GACCAGCAAC CGCGACCTGG ATGTGCGGCA GGAAGCCGTA
TGGCTGCGTG ACAACCTTGA CGTTCCACCC GAAGCCCTGG TGCGCCTCAT GACTGTCAAC
GGCGCTGCTG CCCTCAACCT GCTCCCCAGT GGCGCAGGCC GTCTGGAACC CGGCAGTCCG
GCGGCATTCT GCGTATTGCC CGAAGCCCTC GTCTATTAG
 
Protein sequence
MNPKGPSDLP TGSRAAFAQP QNGNADGRAD QFAGPALAIR ARSIVTLAGE GPSRGARLFA 
PLKKIDNAVL IVRGGLVEEV RPWSAAAAPA GAVVRDVGAV CLAPACVNAH THLELSHLAG
RTVWGKGFTA WLQSLVPLLP EAPDAQAVEN ACAHLAGTGT LYAGNITGSL PGGTLLADAA
CRETGIAASH FCEWFGFGAP FADGIRPWPP RCRQVLQDDP FLAARCAPGG HALYSTGADI
LTAARQDCAR MGRIFSFHLA ESPDETQMLV TGDGPLRHFY EKAVLPEDWQ APGLRPLAYA
VKLGLLGTGT LAVHGTQLDA QEVEVLAASG TALCLCPRSN RNLDLGVPPV RDLLESGCLL
CLGTDGLTSN RDLDVRQEAV WLRDNLDVPP EALVRLMTVN GAAALNLLPS GAGRLEPGSP
AAFCVLPEAL VY