Gene Ddes_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1828 
Symbol 
ID7285541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2204511 
End bp2204852 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content60% 
IMG OID643582648 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002480403 
Protein GI220905091 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCC TGCTCAAGAA TCTGGATTAC GCCACCGCGC TGCCCCTGGC CGCGCAGGTG 
GATTGCCAGC CGGGCCAGGT AGCCAGCAAG ACGCTTGTTC AGAATGATGC CGTGGGTATA
ACCCTTTTCG CCTTTGACAA GGGCGAAAAA ATCAGCGCCC ACACCTCCAC GGGCGACGCC
TTTGTGCTGG CCCTTGAAGG ACAGGGGCAA GTGACCATCA ACGGACAGAC CAGCCCCCTC
AAGGCCGGAG AGTCCATCAT CATGCCCGCA GGGCAGCCCC ATTCCGTCAG CGCTGTGGAG
CGCTTCAAGA TGCTGCTGGT TGTCATTTTT CCGCCGGAGT AA
 
Protein sequence
MQRLLKNLDY ATALPLAAQV DCQPGQVASK TLVQNDAVGI TLFAFDKGEK ISAHTSTGDA 
FVLALEGQGQ VTINGQTSPL KAGESIIMPA GQPHSVSAVE RFKMLLVVIF PPE