| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1798 |
|---|
| Symbol | |
|---|
| ID | 7285511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2170805 |
|---|
| End bp | 2173618 |
|---|
| Gene Length | 2814 bp |
|---|
| Protein Length | 937 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643582618 |
|---|
| Product | ComEC/Rec2-related protein |
|---|
| Protein accession | YP_002480373 |
|---|
| Protein GI | 220905061 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCATC CACCACTGCA AGCCCCGCTG TTATGGCAGC TCTGCCTTTG CTTCTGGATA
GGAGGCATAG CTGCGGCCGT ATGGCCCTGG CAGTCTTTGC TGTGCCTGCT GCTGCTTGTT
CTCGCAGACC GCCGCCTGTG GAAAGCGGGG CGCATTGCCT TCTGTACCCT GCTGGTCCTG
GCCGGGCTGT TCACAGCTCG ATGGCAACTT TACGGCAGCC CCTGGCACGG CGGTCTTCCT
CCAGCTTCTC CACCCTTCTG GCTGGCTGAA GCCCCCAAAG ATATCCGCGT CTGCGGCACA
GTGACCGACA GCCAGGGCCT GCCGGACCAA CGCCTGCGCC TGATTCTGTC TCACATGGCT
CCTGACGCGA CAGCTGCGGC AGACGATGCG TCGCGCCGCG CAGACCTGCG AGCAGCCTTT
GCCGCGCCCT TGCCCGGCCT TGTGGCCTTT ACCTGGGAAA ATCCCACACT GCGCCCGTTA
CCCGGCCAGA CATTTTGCCT GGCACGCCGC CCCATGCCCA TGCAGGGCTT CGCCAATGAG
GGACAATCGG CCTGGGATCT GTGGTGGGCC GCGCAGGACG TACGCTGGCG TCTATGGACG
CAGGCGGAAC GCGGCGAGCC GTTCGTCTCT GGCGAAGGGG GGCGTTCCGC TCGCTGGCGA
GAGTCCCTGC GCGAAAAATT CCTGGCAGCC CTGCAAGCTC CTGCGCAACC GGGCGATCTT
CTTCCTGCGG CCCGGAACGG CAGCCCCACG ACGCATGGAG GGCATACAAC AGCCTCGGGG
CAGATAAAAG AACTCTCCGG CGGGCATGCC GCATCCGGTG GCGAAATGCC GCCCGGCCAG
AAAAGCCTGA GCCAGGGCAA AGCCATTGTA CTGGCCCTGC TTTTTGGCGA CAGGCAATAC
CTCGCCCAGG CGACCCTGAA CAATTTTGCC GCTGCCACCC TGGTGCACAG CCTGGCCCTT
TCGGGCCAGC ACCTTGTGGT AGCAGGCATG ATCGGGCTGT TCTGCGTACT GGCGGCATCA
CGCCTGCGGC CGGGAATCTA TCTGCGCCGC CCCAAAGTCC TGTGGGTCAT GCTCGCCTCT
CTGCCGCCCG CCCTGGGGTA TCTGTGGCTG GGCAACGCCC CGGCATCCCT GTTGCGCGCC
ACAGTCATGA TGCTTGTGGC GGCCCTGTGG ATGGCTTCCG GCCGTCCGCG CACAACCCTG
GACGCACTGG GCGCGGCACT TCTTTGTATC ACGGTATCCT TTCCCCTGAG CGTGCTGGAT
ACCGGACTGC AGCTTTCAGC CCTGTGTGTG GGGGCCATCG GCCTGAGCCT GCCCTGGTTG
CGGCGCATCA TTCCCCTGCC GGACCGTGGT GCGCCCGACT CGCCTTCGCG CGTCACGGCG
TGGCTGCGCG CTCTTATGCG CATTTTTCTT GTTTCACTGT TCATACAGAT CGCCCTGCTA
CCGCTCAATA TGCTGCTTTT CGGCAACGCG GGCTTCTGGT TTCCCCTTAA TGTGGCATGG
CTGCCCGTAG CCGACCTGAT TGTACTGCCC GCAGCCGTAC TGGGCCTGCT GTGCGCGGCC
CTTGGCCTTG AATCACCGGC GCGCCTGATT CTGGATGTGG CCGCCATGCC CTGCCAGTGG
CTGGTGGACT CTCTGGCCTG GCTGGCCGAA AGTGGCCTGC TGGCTGCCCC GGCCATGCTG
CGCCCCCACT GGACGGCCCT GCCGGCCTTT GCTGCCTTGC TTACGGCTCT TGCTTTCATG
GCCGGGCGAA AAACCATGCC TGCGGGAGCA GCGCGACTGC TGCTGGCAGG GGGCGCGTTA
TTGCTGGCAG GGCCGCTGCT GCGCGTGGAA CAGCGCCTTT CACCGGAAAT ACGGCTGGAG
GTGCTGGATG TGGGGCAAAG CCAGGCCGTG GCCCTGCGTT TGCCGGGACA TGTGCGCCTG
CTGCTGGACG GCGGCGGCAG TGCCTCACCG CGCTTTGATC CCGGCCAGGC GCTGGTGGCT
CCAGTCCTCC TCTATAATGA TTCGCCCCGC CTTTCAGCCG TACTGAACAG CCATCCCGAC
CTTGACCATA TGGGGGGACT GGTACATATT CTTGAGTATT TCAAGGTAAA CACCCTGTTT
GACAACGGGC AGGACGGACG CAGCGACAGC GGCTGGGGCG CCCTGTGGAC ACAGGTCAGG
CAACAGCACA AGGCCCGCCC CCTTGCACAG GGCGATGTGC TGCAACTGGG CGACCCGATC
CGCCAGCTCC AGCTGGAAAT ACTGCACCCA CCGCGCAGCG CCCGTGCTGA AGCACATTCG
CCGTGGACCG GAAACAATGC TTCGCTGGTG GCCCGTCTGA CCCACAAGGG CCGCGGCCTG
GCCCTGATCC CCGGCGATGC CGAACGCCGT TCATTGCGGC ACATGCTGGA TCAGGGCATT
GACCTGCGTG CCGAGGTTCT GGTTTTGCCG CACCACGGAT CAGACAGCAG CTATCTGGCT
GATTTTTACA AGGCGGTGCA GCCCCGTGTG GCGGTGGCTG CCTGCGGCTT TGAAAACCGC
TATGGCTACC CCGGTAAAAA AGTGCGCGCA TGGCTGGACA AAGCAGGCAT TCCCCTGCTG
TTCACCGGGC GTGACGGGCA GGTGCAGCTG ACCTGGCCTG GACGTGGCAT GCAGTGGCCC
CCTACCGACG CTGAAGAACG CGCGGTGCTG CATCTACGGA CACAAAGAGG CACTGCCGGG
GTAAACAGTG CCGCGCCGGG CGGCACCAGG CAGGACCATG AAAAAATGCC CGCCAAAGAG
CATAAAGAGG AAGGCGAACT ACGCGGCAAG GCTGATAGCG GACAGACCGA ATAG
|
|---|
| Protein sequence | MRHPPLQAPL LWQLCLCFWI GGIAAAVWPW QSLLCLLLLV LADRRLWKAG RIAFCTLLVL
AGLFTARWQL YGSPWHGGLP PASPPFWLAE APKDIRVCGT VTDSQGLPDQ RLRLILSHMA
PDATAAADDA SRRADLRAAF AAPLPGLVAF TWENPTLRPL PGQTFCLARR PMPMQGFANE
GQSAWDLWWA AQDVRWRLWT QAERGEPFVS GEGGRSARWR ESLREKFLAA LQAPAQPGDL
LPAARNGSPT THGGHTTASG QIKELSGGHA ASGGEMPPGQ KSLSQGKAIV LALLFGDRQY
LAQATLNNFA AATLVHSLAL SGQHLVVAGM IGLFCVLAAS RLRPGIYLRR PKVLWVMLAS
LPPALGYLWL GNAPASLLRA TVMMLVAALW MASGRPRTTL DALGAALLCI TVSFPLSVLD
TGLQLSALCV GAIGLSLPWL RRIIPLPDRG APDSPSRVTA WLRALMRIFL VSLFIQIALL
PLNMLLFGNA GFWFPLNVAW LPVADLIVLP AAVLGLLCAA LGLESPARLI LDVAAMPCQW
LVDSLAWLAE SGLLAAPAML RPHWTALPAF AALLTALAFM AGRKTMPAGA ARLLLAGGAL
LLAGPLLRVE QRLSPEIRLE VLDVGQSQAV ALRLPGHVRL LLDGGGSASP RFDPGQALVA
PVLLYNDSPR LSAVLNSHPD LDHMGGLVHI LEYFKVNTLF DNGQDGRSDS GWGALWTQVR
QQHKARPLAQ GDVLQLGDPI RQLQLEILHP PRSARAEAHS PWTGNNASLV ARLTHKGRGL
ALIPGDAERR SLRHMLDQGI DLRAEVLVLP HHGSDSSYLA DFYKAVQPRV AVAACGFENR
YGYPGKKVRA WLDKAGIPLL FTGRDGQVQL TWPGRGMQWP PTDAEERAVL HLRTQRGTAG
VNSAAPGGTR QDHEKMPAKE HKEEGELRGK ADSGQTE
|
|---|
| |