Gene Ddes_1797 details

Gene Information

• Locus tag: Ddes_1797
• Symbol: smpB
• ID: 7285510
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: +
• Start bp: 2170106
• End bp: 2170561
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643582617
• Product: SsrA-binding protein
• Protein accession: YP_002480372
• Protein GI: 220905060
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAGA AAACATCTCC TTCCACCATT GCCGTCAATA AGAAGGCCCG CCACCTTTAT 
GAACTTTCAG AGTTCACCGA GGCGGGCGTT GTGCTTACCG GACCCGAAGT TAAAAGCATA 
CGCGCGGGCA AGGTCAACTT CGTCGACAGT TACGTGGACT TCCGCCGGGG CGAAGCCTGG 
CTGCTGTCAC TGCACATCGC CCCCTATTCC AATGCGGGCT ATGCTCCGCA GGAACCGGAA 
CGCGCGCGCA AGCTGCTGCT GCACCAGCGC GAGATCGCCA AGCTGTCGGG TATTGTGGCC 
CAAAAGGGCC TTACCGTGGT TCCTGTTCGG CTCTACCTCA AGCGGGGAAA AATCAAGGTT 
GAAATCGCCG TGGGCCGGGG CAAAAAGCTG CACGACCATC GCGAAAGCCT GAAACGCCGC 
GCTGAAGAGC GTGATCTGGC CCGCGAGCTG TCGTAA 

 

Protein sequence

MSQKTSPSTI AVNKKARHLY ELSEFTEAGV VLTGPEVKSI RAGKVNFVDS YVDFRRGEAW 
LLSLHIAPYS NAGYAPQEPE RARKLLLHQR EIAKLSGIVA QKGLTVVPVR LYLKRGKIKV 
EIAVGRGKKL HDHRESLKRR AEERDLAREL S