Gene Ddes_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1768 
Symbol 
ID7285480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2136309 
End bp2137286 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content58% 
IMG OID643582587 
ProductNLP/P60 protein 
Protein accessionYP_002480343 
Protein GI220905031 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAT GTCTGAAACT GTGCGCGTTG ATGATGGGCT GCGTGTTGGC CTTTGGTTGC 
GCCGCCAAAA AAGGTCCACA GGAAGACAGC ATTGACAGCC TGCGCGCCGA GCGGTTCCGA
CGCTCCTATG AGGCGGCTTT TGATTCCAAC CAGCAAGAGG CCGGCCAGCA GCTCCTTCGC
AAGGCCAGGT CAGCCATCGG CACCCCCTAT GTGCGCGGCG GAACTACCCC GGACGGCTTT
GACTGTTCGG GTTTTGTCTG CTGGACGTAT AAAAGCGTCG GCGTACAGTT GCCCCGCACC
GCGCGTGAAC AGTCTGTCAT CGGGCAGCGC ATCACCAAGG TGGAAGACAT GCGTGCCGGA
GATATCGTGG CCTTTCGCCA CCCCCGTCGG GGCTATCATA CAGGCATCTA TGTGGGCGAC
GGCAAGTTTA TCCACAGCCC ACGCAAACGC ACCAAGGTGC GCATCAATTC TCTGGACGAT
CCCTATTTCA AAACCACGTT TCTCAGCGCG CGCCGCGTAA AAGTTGAAGG CGGCGAAACG
CTGACGGCTC AGGCCGAAAG CCGCCTCAGC GATTTTACCG AAGAAAAGGT CATACGCGAA
CTGGCCCGCG ACAAGAAAAA ACCAGCAAAA AGCCGGGCCG CTGCCACACG CGACAACAAG
CGCACGAACA CGCGAGAGAA AAAACGGGAT GCGACCATAC AGGTCGCCAG CAACGACAGA
AAGGGCGCCG CCCCGGCCCG CGCTGCAGAA GCCAGAAACA GCAAAAATGC CAAGCAGGCC
GCGCAGACCG CCAAAGCGCC AGCCAAAACT GCCGGCAAAG CCCAAAGCAA ATCACAGAAC
AAGGCCGGAG CAACAGCCAA AAAACCCGAC AATAAAAAAA CCGAAGCCAA AAAGCCCGCA
CCCGCCAAAA CCTCGGCAGC CAAAAGTGAC TCCGGGAACA AGAAGAATCA GGGCAAGGAC
AAAAACAACA GATCCTGA
 
Protein sequence
MGKCLKLCAL MMGCVLAFGC AAKKGPQEDS IDSLRAERFR RSYEAAFDSN QQEAGQQLLR 
KARSAIGTPY VRGGTTPDGF DCSGFVCWTY KSVGVQLPRT AREQSVIGQR ITKVEDMRAG
DIVAFRHPRR GYHTGIYVGD GKFIHSPRKR TKVRINSLDD PYFKTTFLSA RRVKVEGGET
LTAQAESRLS DFTEEKVIRE LARDKKKPAK SRAAATRDNK RTNTREKKRD ATIQVASNDR
KGAAPARAAE ARNSKNAKQA AQTAKAPAKT AGKAQSKSQN KAGATAKKPD NKKTEAKKPA
PAKTSAAKSD SGNKKNQGKD KNNRS