| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1757 |
|---|
| Symbol | |
|---|
| ID | 7285469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2123494 |
|---|
| End bp | 2124894 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643582576 |
|---|
| Product | Undecaprenyl-phosphate galactose phosphotransferase, WbaP |
|---|
| Protein accession | YP_002480332 |
|---|
| Protein GI | 220905020 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.300233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CTTCGCGCTG GGTTCATCTC GCTTCTCTTT TTGGTATTTC AGCCCAGAAA
TTCCTGCTGT GTCTGTTTGA CCTGCTGGCC CTTCTGGGAA CCGCTCTCGC TGTATTTCTT
GTCAGAGCCA CTTTTGGCGG CCTTGATCCC GTACTGTACC ACTGGGTTGT ACCCATGCTC
CTGCTCGGCC CTGTTTTTGG CGCCGGGCTG GGGCTGTACC AGACCGTAAG CCTTGCGCCA
CACCGTGAAC TCAAGGCGCT GTTTCAGCTG ACAAGCCTTC TGTACGCCAT TATTCTGGCG
GTTCTTTTTC TGTCCAAAAC CGGCGACGCC TATTCACGCA TTGTCATTAT GGGTAGTTGG
GCTGCTACTC TTTTCAGCAT GCCGCTCATG CGCAGCCTGT GCCGCCGTCT TTACGCGCGG
CGGCGCTGGT GGGGCAAACC CCTCGTTATT TTTGACCATT GCAGTGAAGG GCGCGAACTG
TGGCACTATC TGAAGCGCCA CCCCGACAGG GGGCTTAACC CGGTGGCCAT CTACGATCTG
CCTGATGCGC CGGAGGACAT GCGCTGCCTG TTTGCCTCTG TTGCTGCCCG GCAGCCCAAG
GCTATGGCCC TGCTGCTGCA AAGAGTGGGC AAGGCGCAGG ATGTGGACGT GATCACCGAG
GCCAGCCGGT ACTTCAGCAG CACCCTGGTG GTCCCGGCTT TTGGCGGCAA TTTTCGTGTC
CACTGGCTGA CGCCGCGCGA TCTGGGCAAT GCCGTGGGGC TTCTGGTACG GCAAAATCTG
CGTGACAGGC GCCGCCTTTT TGTCAAAAGA TGTCTGGATA TCGGTCTGTG CCTGCTTGGT
TCGGCCCTTT TACTGCCTCT TGGGGCTGTT CTTGCCCTTA TAATAAAGCT GGACAGCCCC
GGGCCGGTTT TTTACCGCCA GACGCGTATC GGTCGAGGCG ACAGGGAGAT CCGGATATTC
AAGTTCCGCA CTATGGTGTG TGACGCGGAC AGGGTGCTCA GGGACATGCT GAGCAGCGAT
GCCGGCCTGC GCGCAGAATG GGCCTGTGAC CGCAAGCTCA AGTGCGATCC GCGCGTTACC
CGCGTAGGGC GCTTGCTGCG CAAGCTCAGT CTTGACGAAT TGCCGCAGCT CATCAACGTG
GTGACGGGCG ATATGAGCCT TGTGGGGCCG CGCCCCATCG TCAGGGCCGA AGTGAAAAAA
TACGGCCCTG TATTTGACGA ATACTGCATG GTGCGGCCCG GCATTACGGG CTTGTGGCAG
GTTTCCGGCC GCAATAATAC CACCTATGAG GAGCGCGTGA ATTTTGACCA GTATTATATC
AACAACTGGT CTGTATGGAT GGATCTGTGG ATTATGTGCA AAACCGTGCC TGTGGTCATT
CTGGGGCATG GAGCCTACTG A
|
|---|
| Protein sequence | MKKTSRWVHL ASLFGISAQK FLLCLFDLLA LLGTALAVFL VRATFGGLDP VLYHWVVPML
LLGPVFGAGL GLYQTVSLAP HRELKALFQL TSLLYAIILA VLFLSKTGDA YSRIVIMGSW
AATLFSMPLM RSLCRRLYAR RRWWGKPLVI FDHCSEGREL WHYLKRHPDR GLNPVAIYDL
PDAPEDMRCL FASVAARQPK AMALLLQRVG KAQDVDVITE ASRYFSSTLV VPAFGGNFRV
HWLTPRDLGN AVGLLVRQNL RDRRRLFVKR CLDIGLCLLG SALLLPLGAV LALIIKLDSP
GPVFYRQTRI GRGDREIRIF KFRTMVCDAD RVLRDMLSSD AGLRAEWACD RKLKCDPRVT
RVGRLLRKLS LDELPQLINV VTGDMSLVGP RPIVRAEVKK YGPVFDEYCM VRPGITGLWQ
VSGRNNTTYE ERVNFDQYYI NNWSVWMDLW IMCKTVPVVI LGHGAY
|
|---|
| |