| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1734 |
|---|
| Symbol | |
|---|
| ID | 7285446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2099174 |
|---|
| End bp | 2100313 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643582554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002480310 |
|---|
| Protein GI | 220904998 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00120517 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCA TTTCTTTTTT GCATACGCTG CCGCGCACGG CGGCCGTCAT TTTTTCCGCC
ACAATGTGTA TGGCTGCCCT TTGCGGCCTC ACGGCAGCTT CCGCCGGGGC GCAGGTAACC
CTGCTCGTTC CGAGCCAGCC CAGCATTGAG GCTCCCGCCA AGACGGAAAA GGCCGAGCCA
GCGGGCAAAC GCGAAGACAA AAAGCAGGAA GGCAGGCAAT CCGCCCCCAA AACGGAAAAA
AATACGGACG CAGGCAAAAA CAAGACCGCG CCTGCCAAAG CAGCCCCCCA GCCCGCTGCC
CCGCCCCAGG GACAGGGCGC GTCCCCCACT GCGGAACAGG ACCCCGGGCA GAGTACGGCA
GCAACTGCCG GGCAGCCCGC CGCACAGCCT GCGGAGGAGA CACAGACTCC GCCTCCTGCT
CCCGAGCTTC CTGCCATTGA TGAACAGGTG GATGTACTTA TCACCATGAT GCGGCCCTTT
CAAAACCAGG GGCTTGTCAT GGATATGCCC CAGCTTTTCG CCGTATTGCG CTACGACAAT
GCCAGTCCCG TCAAGGATGG CCTTATTCAG CCCGAACGGC GCGACCTTCT CGGCGACGTG
GAAGAGATAG GCTATCTTGA CCAGAAGGCA TGGGGCGCCA ACGTGGCCCT CGCCCATCCC
GGCCTTTACC AGTTCATCAT TGAAGGACGC CCCTGGTGGG ATGCGGCTCA CGGCCAGTTT
CTGCAGCACT ACGTCAAGGC GGTGCTGCCC GTGCATGGCG TGGAACGAGG ATGGGATCAA
CCCGTGGGCC AGACCTTTGA AATCCAGCCC CTTGTCCGTC CTTTCGGCCT CACCGCTCCT
GCCCTTTTCT CCGGTGTGGT TCTGCTGCAC GGCAAACCTT TGGCAAACGC CTCTGTGCGT
ATGTCCAGAA TCAACACCGA AAAACGTACA GTTCCCACGC CGTGGCATGA AGAAATGGCG
GCCCGCTCCG ACAAGGCTGG GCAGTTTTCC TTTGTTCTCA ACCAGCCCGG CTGGTGGTAC
TGCATAGCCA CCGCACCCGG CGACCCCCTC AAAGGCCCTG ACGGCCAACC CAAGGCCCTC
AACCTGGGGG CAGTATTCTG GCTTTATGTG GACGGTGCCG CCGATGCCCG CAAACGCTGA
|
|---|
| Protein sequence | MPRISFLHTL PRTAAVIFSA TMCMAALCGL TAASAGAQVT LLVPSQPSIE APAKTEKAEP
AGKREDKKQE GRQSAPKTEK NTDAGKNKTA PAKAAPQPAA PPQGQGASPT AEQDPGQSTA
ATAGQPAAQP AEETQTPPPA PELPAIDEQV DVLITMMRPF QNQGLVMDMP QLFAVLRYDN
ASPVKDGLIQ PERRDLLGDV EEIGYLDQKA WGANVALAHP GLYQFIIEGR PWWDAAHGQF
LQHYVKAVLP VHGVERGWDQ PVGQTFEIQP LVRPFGLTAP ALFSGVVLLH GKPLANASVR
MSRINTEKRT VPTPWHEEMA ARSDKAGQFS FVLNQPGWWY CIATAPGDPL KGPDGQPKAL
NLGAVFWLYV DGAADARKR
|
|---|
| |