Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1717 |
Symbol | |
ID | 7285428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 2076182 |
End bp | 2078212 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643582536 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_002480293 |
Protein GI | 220904981 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAACC AGATGAGTCG CAACCTGATG CTGTGGGCCA TTATCGTCCT GGCGATGGTT ATGCTTTTTA ATATGTTCCA GCAGCCACAG GGCGTGATGC AAAGAGTGCC CTATTCTGAC TTTCTGAGTC AGGTGGACGG CGGTCAGATA CTGTCTGTAA CCATGCAGGG GCACACGCTT ACAGGTAAAA CATCAGACGG CAAAACCGTG CAGACCTACG CTCCGCAGGA CCTGGGTCTG GTTAACCGCC TTATTGAAAA AAAGGTGGAA GTCAAGGCAG AGCCGCCGGA AGAGCAGCCC TGGTACATGA CGCTGCTGGT TTCGTGGTTT CCCATGCTCC TGCTTGTGGG CGTATGGATC TTTTTCATGC GGCAGATGCA GGGCGGCGGC GGAAAGGCCA TGAATTTTGG CCGCTCACGC GCCCGCATGC TCAATCAGGA CAGCGCCCGC GTCACTTTTG CCGATGTGGC CGGGGTGGAC GAAGCCAAGG ATGAACTCGC CGAAGTGGTG GAGTTTCTGT CCAATCCCAA AAAATTTACC CGGCTTGGCG GGCGTATCCC CAAGGGGGTG CTGCTCGTGG GGCCTCCCGG TACGGGCAAG ACGCTTCTGG CGCGCGCCGT TGCAGGTGAA GCCGGGGTGC CTTTCTTTTC CATTTCCGGC TCGGACTTTG TAGAAATGTT TGTGGGCGTG GGCGCTTCGC GCGTGCGCGA CCTTTTCGTG CAGGGCAAAA AAAATGCGCC TTGCCTTATT TTTATTGACG AAATTGACGC TGTTGGCCGT CAGCGCGGCG CCGGACTCGG TGGCGGGCAT GACGAGCGCG AACAGACGCT GAACCAGATG CTGGTAGAGA TGGACGGTTT TGAAAGCAAT GAGGGTGTCA TCCTTATTGC CGCCACCAAC CGTCCCGACG TGCTGGACCC GGCCCTGCTG CGTCCCGGCC GTTTTGACCG TCAGGTGGTG GTTCCCACCC CCGACCTTCG CGGGCGTCGC CGTATTCTTG AGGTACACAC CAAGCGTACC CCGCTTTCCG GCGATGTGGA CCTGGAGGTT CTGGCCCGCG GTACGCCCGG CTTCTCCGGC GCGGATCTGG AAAACCTGGT CAACGAGGCT GCCCTTCAGG CTGCCAAGCT GAATCAGGAC AGGCTGGACA TGCACGACTT TGAATACGCC AAGGACAAGG TTCTTATGGG GCGTGAGCGC CGCAGCCTCA TCCTTTCTGA TGAGGAAAGA CGCATCACAG CCTATCACGA GGGCGGCCAT GCGCTGGCGG CGCGCCTTTT GCCCGGCTCG GACCCGGTGC ACAAGGTCAC CATCATTCCG CGCGGGCGCG CTCTTGGCGT GACCATGCAA CTGCCCGAAG AAGACCGTCA CGGCTACTCG CGCTCCTATC TGCGCAATAC CCTGGTGGTT CTGCTTGGCG GCCGCGTGGC CGAAGAGCTT ATTTTTGACG ATATCACCAC CGGGGCCTCC AACGACATCG AGCGCGTCAC CCGCATGGCC CGTAAAATGG TCTGCGAGTG GGGTATGAGC GAAGCTGTCG GTACGCTGGC TATCGGCGAA ACCGGCGAAG AGGTCTTTAT CGGCCGGGAA TGGGTGCAGA ATAAGAACTT CAGCGAAGAC ACCGCTCGCC TGGTGGATTC GGAGGTCAAG CGTATTGTGG ACGAAGCGCA TGAGCGCTGC CGCACGCTGC TGAAGGAAAA CGAAGAAACG CTGCACCGCA TTGCCCGTGC CTTGCTGGAT CGTGAGACCA TTACCGGTGC AGAACTTGAA CTCCTGATGG AAGACAAGGA GTTGCCTCCG CTGGACAGCA ACGGTAAACC CGTCAAGTAT TCCGAAGCTC CCAGCCGCCC CGGCAAGAGC GGCGGAAGCG CCAGGGGCGA GTCAGCCGTT GGCGACGAGC CTGCCGAGTT CACCCTTGAG CCGGATACAG GCAGTGAAGA TGCCCCGGCA GCTCCGGCGG AAGCGGAAAG TGCTGGAAGC GGCGAAGTGG CCGCCAAGAA TGGTGAAGAC GACAACAAGC GAAATCAGTA A
|
Protein sequence | MLNQMSRNLM LWAIIVLAMV MLFNMFQQPQ GVMQRVPYSD FLSQVDGGQI LSVTMQGHTL TGKTSDGKTV QTYAPQDLGL VNRLIEKKVE VKAEPPEEQP WYMTLLVSWF PMLLLVGVWI FFMRQMQGGG GKAMNFGRSR ARMLNQDSAR VTFADVAGVD EAKDELAEVV EFLSNPKKFT RLGGRIPKGV LLVGPPGTGK TLLARAVAGE AGVPFFSISG SDFVEMFVGV GASRVRDLFV QGKKNAPCLI FIDEIDAVGR QRGAGLGGGH DEREQTLNQM LVEMDGFESN EGVILIAATN RPDVLDPALL RPGRFDRQVV VPTPDLRGRR RILEVHTKRT PLSGDVDLEV LARGTPGFSG ADLENLVNEA ALQAAKLNQD RLDMHDFEYA KDKVLMGRER RSLILSDEER RITAYHEGGH ALAARLLPGS DPVHKVTIIP RGRALGVTMQ LPEEDRHGYS RSYLRNTLVV LLGGRVAEEL IFDDITTGAS NDIERVTRMA RKMVCEWGMS EAVGTLAIGE TGEEVFIGRE WVQNKNFSED TARLVDSEVK RIVDEAHERC RTLLKENEET LHRIARALLD RETITGAELE LLMEDKELPP LDSNGKPVKY SEAPSRPGKS GGSARGESAV GDEPAEFTLE PDTGSEDAPA APAEAESAGS GEVAAKNGED DNKRNQ
|
| |