| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1710 |
|---|
| Symbol | |
|---|
| ID | 7285421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2066733 |
|---|
| End bp | 2068025 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643582529 |
|---|
| Product | aromatic hydrocarbon degradation membrane protein |
|---|
| Protein accession | YP_002480286 |
|---|
| Protein GI | 220904974 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TTCGCGCACT GGCGCTGGTG CTGGCCCTGG TTCTCTGCTG TTCGCCCGAT
GCCCGGGCTG AAGGCTTTGC CCTTAACGAA TGGAGCGCCC GCGGGGTGGC TCTTGCCGGC
GGCATGGTGG GCCGCGCGGA TGATGTGTCC ACTCTGGCGT ATAATGCCGC GGGTATAACA
CAGATTCCCG GCACTCACGT TATGGGCGGC CTGGCCTTTA TTGCTCCTAT GGGTACCATT
GTGTCCGACA TGGCCAACGG AGTGGAAAAG CATACCTCTA CCAAGCCCAA TGTGTGGCTG
GCGCCGCACG GTTTTGTGAG CCATCAGCTA AACGATAATG TGTGGCTGGG CTTTGCCTCT
TTCAGCCGCT TCGGTCTGGG CAATTCTTTC AACAGCCAGT GGGTCGGCCG GTACAATATG
TATGATATCG GCATGCAGAC CGTGTCGTTT GTGCCCAGCC TGGCCTACAA GGTCAACGAC
ATGCTCTCCC TTTCCGTGGG AGTGGAGGCC CTGTACGCCC ATGTGTACAT GGGCAACAAG
GTCCCGACGA TAACTGCCGC ATCCTATCCG GATATTGTCG GTAATGATCT GCAACTGGAA
GGCAGCGGCT GGGGCGTGGG CGCGCATCTC GGCATGCACA TGCGTTTCAA TGACCAGTGG
TCCCTGGGCC TTTCCTACAA AAGCCAGATC ACGCTCAACC TTTTCGGCGA TGTGGACTTC
GGCCATGAGG GGCCAAACGG CCTGATAACC GCAGGGAAAA TGCACGGTCC TGAAGCCCGC
GACCGTAGCG CCAACGCCAC TTTGCAGCTT CCCGACTCCA TCGCTCTCGG CATTGCCTAC
AAGCCTCTGG ATAACCTGAG TTTTGAGGTC GGTTCGGTCT TTACCCGCTG GTCTACCTAT
AATGCATTGA ATATCAATAT GGGCGATGAC TATTCTGCCA TCAATAACAA GGAATGGCGC
GACGGCTGGA ATTTCAACGC CAGTGTGGAA TACAAGCCCC TGGACTGGTG GGCCTTGCGC
GCGGGCTTTG CTTACGAAAC TCCCGTGGTC AACGAAAGCT ACAGCGACTA CATGATGCCC
ACCAACGGGC GCACCATGAT GAGCCTGGGG ACGGGCTTTA CGTGGGAGAA CTGGACAGTT
GACCTGACCT ACGCCCATTT GTGGATCAAT CCCGTGGACT ACGACAATAC CGAAACTTCC
GGCATCCGCT CCGCCGCCAG CGGGATCAAG GGCGGCCACT CGGAAAATGT GCAGGCCAAT
ATCTACATGT TCTCTGTGGG CTATTCTTTT TAG
|
|---|
| Protein sequence | MKIFRALALV LALVLCCSPD ARAEGFALNE WSARGVALAG GMVGRADDVS TLAYNAAGIT
QIPGTHVMGG LAFIAPMGTI VSDMANGVEK HTSTKPNVWL APHGFVSHQL NDNVWLGFAS
FSRFGLGNSF NSQWVGRYNM YDIGMQTVSF VPSLAYKVND MLSLSVGVEA LYAHVYMGNK
VPTITAASYP DIVGNDLQLE GSGWGVGAHL GMHMRFNDQW SLGLSYKSQI TLNLFGDVDF
GHEGPNGLIT AGKMHGPEAR DRSANATLQL PDSIALGIAY KPLDNLSFEV GSVFTRWSTY
NALNINMGDD YSAINNKEWR DGWNFNASVE YKPLDWWALR AGFAYETPVV NESYSDYMMP
TNGRTMMSLG TGFTWENWTV DLTYAHLWIN PVDYDNTETS GIRSAASGIK GGHSENVQAN
IYMFSVGYSF
|
|---|
| |