| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1705 |
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| Symbol | |
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| ID | 7285416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 2057212 |
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| End bp | 2058834 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582524 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_002480281 |
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| Protein GI | 220904969 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAA CCATTCGTCA GGTCACATTT GAACTTTTAC GCCAGCTGGG CATTACCACA
ATCTTTGGCA ACCCCGGCTC AACTGAAGAA ACATTTTTGA AAGATTTTCC TAAAGATTTC
ATATATATTC AGACTCTTCA AGAAGCTTCA GCCGTGGGCG CCGCCGACGG CTATGCCCAG
GCAACACGTA AGCCCGCACT GGTAAACGTG CACACTTCTG CCGGTCTTTG CAATGCCATG
AGCAATATTC TTACTGCCAG CATGAACAAG ACGCCTCTCA TTATTACAGC TGGCAACCAG
ACGCGCGAAA TGCTCCTTAT GGAGCCGTGG CTCACCAACG TGGAGCCTGC CGAACTGCCC
AAGCCCTGGG TCAAGTGGAG CTACGAACCT GTACGCGCCG AAGATGTGCC TGCCGCCTTC
ATGCGAGCCT ATGCCATGGC CATGCAGCCC CCGACCGGGC CTGTTTTCCT CTCCATTCCG
CTTGATGACT GGGACAAGCC TGCACTGGGC GAACCCGTGG CACGCAGCCT TGCCGGCCGC
GTTGGGCCGG ACCCCAAACG CCTGGCCGAA TTTGCCGACC TGCTCTCCAA GGCCAAAAAT
CCCGCTCTCA TCTACGGCGC GGCCATTGCC AGGGGAGACG GCTGGAAACA GGCCGTGGCC
CTGGCTGAAA AACTCAATGC CAAGGTATGG GCCGCCCCCG CCTCGGAGCG CCCGCCCTTC
CCCGAAACCC ATCCGCTGTA CGCTGGCGGC CTGCCCTTTG CCATCGGGCC GCTAGCCAAA
AAGCTTGAAG GGCACGATGT GGCCATTGTG ATCGGCGCGC CCGTATTCCG TTATTATCCG
TATGTTGAGG GCCAGTATAT TCCTGACGGT CTGCGCCTGC TGCATATTTC CGATGACCCC
GCAGAGACGG GCCGCGCGCC GGTGGGCGAC AGCATGCTGT GCGATGCGGT GCTGGCCCTG
GAAGCGCTGG AAACGCTGGT GCAGGCGCGC TCTGCCACAT GCGAAGTCTG CAGGCAGCCC
CATTGTATGG CTCCCCATGC AGCCGCTCCT GCTGCGGCCC CCGGCAAGGT GATGACCGCC
CTGGAACTTT TCAAGACGCT GCGTGAATGC ACACCCGCTG AAGCTGTGCT GGTGGAAGAA
TCTCCCTCCA ACCTGGGCGA ACTGCATACG GCATGGCCGG TGGAACGTCC TGACTCTTTC
TATACTTTTG CCAGCGGCAG CCTGGGCTGG AACCTGCCCG CCAGCGTGGG CATCGCCCTT
GCCGAGCGCG ACAGCGGGCG CAACCGCCCG GTAGTCGCCA TTATCGGCGA CGGCTCCATG
CAGTATTCTG TTCAGGGACT GTGGACAGCG GCACAGCAGG GACTGCCCAT CCTTTTTGTC
ATACCGAGAA ACGGCGAATA CGCCATTCTG AAGTCTTTTG CCGTTCTGGA AGAAACCCCC
GGCGTCCCGG GCCTTGACCT GCCGGGCCTT GATACGGTTG CCATCGCCAA GGGCTACGGT
TGCGAAGCCA TACGCGTTGA AACCGTCGAC GAAGTGCGCA AGGTTTGCGC CGAAGCTTTC
AAACGCTCCG GCCCCACCCT TATAGAAGTG CCCATCGTCC CCACCATCCC GCCCCTGCTT
TAG
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| Protein sequence | MAKTIRQVTF ELLRQLGITT IFGNPGSTEE TFLKDFPKDF IYIQTLQEAS AVGAADGYAQ
ATRKPALVNV HTSAGLCNAM SNILTASMNK TPLIITAGNQ TREMLLMEPW LTNVEPAELP
KPWVKWSYEP VRAEDVPAAF MRAYAMAMQP PTGPVFLSIP LDDWDKPALG EPVARSLAGR
VGPDPKRLAE FADLLSKAKN PALIYGAAIA RGDGWKQAVA LAEKLNAKVW AAPASERPPF
PETHPLYAGG LPFAIGPLAK KLEGHDVAIV IGAPVFRYYP YVEGQYIPDG LRLLHISDDP
AETGRAPVGD SMLCDAVLAL EALETLVQAR SATCEVCRQP HCMAPHAAAP AAAPGKVMTA
LELFKTLREC TPAEAVLVEE SPSNLGELHT AWPVERPDSF YTFASGSLGW NLPASVGIAL
AERDSGRNRP VVAIIGDGSM QYSVQGLWTA AQQGLPILFV IPRNGEYAIL KSFAVLEETP
GVPGLDLPGL DTVAIAKGYG CEAIRVETVD EVRKVCAEAF KRSGPTLIEV PIVPTIPPLL
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