| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1676 |
|---|
| Symbol | |
|---|
| ID | 7285379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2014197 |
|---|
| End bp | 2015216 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643582489 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_002480253 |
|---|
| Protein GI | 220904941 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC TACAACACAG AGACTTTCTG AAAGAAATCG ATTTCACGCC GGAAGACCTC
ACCTACCTGC TGGACCTGGC TGCCAATCTC AAACAGGCCA AAAAATCCCG CCGGGAACCC
GAGTTTCTGA AGGGCAGGAA CATTGTTATT CTTTTTGAAA AAGACTCCAC CCGTACCCGC
TGTTCTTTTG AGGTGGCCGC CTATGATCAG GGCGCGCGCG TGACCTACCT TGGACCTTCC
GGTTCACAAA TGGGCAAAAA AGAATCCCTG GCCGATACGG CCCGTGTGCT TTCCCGCTTT
TATGACGGCA TTGAATATCG CGGCTTCGGA CAGGAAAGGG TCGAGGCGCT GGCCGAGCAT
GCCTCGGTAC CGGTATGGAA CGGCCTGACC AATGAATGGC ATCCCACCCA GTTCCTGGCA
GACATGCTCA CCATGCGCGA ATGCTGCTCC AAGCCCCTGA ACAGGCAAAC CCTGGCCTAT
ATGGGTGACG CCCGCTATAA CATGGGTAAT TCTCTTATGA TCGGCTCCGC CCTTCTGGGG
CTGGATTTTC GTTCTGTGGC ACCAAAGGCG CTGTGGACAG CGGACGAAGT TTACGAGATG
GCCTGCCACA TCGCCTCCGG CACTGGCGCG CGCATCAGCC GCACCGAAAA CGTGGTGGAA
GGCGTACAGG GCTGCGACTT CATTTCTACA GACGTCTGGG TATCCATGGG CGAACCCGAT
GACGTGTGGA AAGAACGCAT TGAACTGCTC ACGCCCTATC GTGTAACGGG CGACACCATG
CGGCAGACCG GCAATGACGA CTGCAAGTTC TTGCATTGCC TGCCAAGTTT TCATAACCGT
GACACAAGCA TGGGCGAAGA GATTTTCCAG CGCTTCGGCA TAGAATGCAT GGAAGTCAAC
GACGAGGTTT TCGAGTCACC ACGCAATGTG GCCTTTGAAG AAGCCGAAAA TCGCCTTCAC
ACCATCAAGG CGGTCATGGT CGCCACATTG GCCGAAAGCC CGCTTGTTTT CAACGTATAG
|
|---|
| Protein sequence | MNRLQHRDFL KEIDFTPEDL TYLLDLAANL KQAKKSRREP EFLKGRNIVI LFEKDSTRTR
CSFEVAAYDQ GARVTYLGPS GSQMGKKESL ADTARVLSRF YDGIEYRGFG QERVEALAEH
ASVPVWNGLT NEWHPTQFLA DMLTMRECCS KPLNRQTLAY MGDARYNMGN SLMIGSALLG
LDFRSVAPKA LWTADEVYEM ACHIASGTGA RISRTENVVE GVQGCDFIST DVWVSMGEPD
DVWKERIELL TPYRVTGDTM RQTGNDDCKF LHCLPSFHNR DTSMGEEIFQ RFGIECMEVN
DEVFESPRNV AFEEAENRLH TIKAVMVATL AESPLVFNV
|
|---|
| |