| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1672 |
|---|
| Symbol | |
|---|
| ID | 7285375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2008342 |
|---|
| End bp | 2009193 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643582485 |
|---|
| Product | respiratory-chain NADH dehydrogenase subunit 1 |
|---|
| Protein accession | YP_002480249 |
|---|
| Protein GI | 220904937 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCCA TCCTCAGTGC TGTCGGCGGA TTGATATTGT CGCCCCTGGT GGGGGGCCTG
CTTACCGGGG TTGACCGCCG TCTCACGGCG CGGCTGCAAT CGCGCCTGGG GCCGCCCCTG
CTTCAGCCTT TTTACGATGT CTTCAAGCTT TTCGGTAAAG AAGCCAGCGT AACCAATGCC
TGGCTTGTAT TCAGCGCCTA TATGACGCTT ATCTCCTCGG CTTTGGCACT GCTCATATTC
TTTATGGGTG GCGACCTGCT GCTGCTTTTC TTTGTGCTTA CGGTGGGTGC TGTTTTTCAG
GTGGTGGGCG CCCTGTGTGT TCCTTCGCCC TACAGCAACG TGGGCGCGCA GCGCGAGCTT
CTGCTCATGC TGGCCTATGA ACCCATACTG ATTTTGGTTT TTGTCGGCTT TGCCATGTGC
ACGGGATCTT TTTCCATTGA GGCCGTGTTT GCCCAGGACC AGCCCCTGCT GCTCAAGATG
CCCCTGCTGT TTCTGGCGCT GGGCTACGCC CTGACCATCA AGCTGCGCAA GTCGCCCTTT
GATATTTCTG CCAGCCATCA TGGCCATCAG GAACTGGTAA AGGGTGTGCA GACGGAATAT
TCCGGTCCTT ACCTGGGCAT CATTGAGCTG GCCCACTGGC TTGACCTTGT GCTTATTCTC
GGTTTGTGCG CCATGTTCTG GCACACCAGC GTCATTGGCA TGGCCACGCT GGTGGCGGCT
TCGCTGTTTA CAGAAATCCT CATCGACAAC ATCACCGCCC GGCTTACCTG GCAGTGGATG
GTGCAGAAGA AATCCCTGTT GCTCGGCATG GGGCTGGCCC TGGTTAATCT TTTATGGCTG
TACGTGGCGT AA
|
|---|
| Protein sequence | MLSILSAVGG LILSPLVGGL LTGVDRRLTA RLQSRLGPPL LQPFYDVFKL FGKEASVTNA
WLVFSAYMTL ISSALALLIF FMGGDLLLLF FVLTVGAVFQ VVGALCVPSP YSNVGAQREL
LLMLAYEPIL ILVFVGFAMC TGSFSIEAVF AQDQPLLLKM PLLFLALGYA LTIKLRKSPF
DISASHHGHQ ELVKGVQTEY SGPYLGIIEL AHWLDLVLIL GLCAMFWHTS VIGMATLVAA
SLFTEILIDN ITARLTWQWM VQKKSLLLGM GLALVNLLWL YVA
|
|---|
| |