Gene Ddes_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1669 
Symbol 
ID7285372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2006207 
End bp2007289 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID643582482 
ProductNADH-ubiquinone oxidoreductase chain 49kDa 
Protein accessionYP_002480246 
Protein GI220904934 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC GCACCACAGT CATTCCTTTC GGGCCGCAGC ACCCCGTGCT GCCCGAGCCG 
CTGCACATCA AGTTTGTGGT GGAGGACGAA ACCGTTGTCG GGGCTATCCC GCAGCTTGGT
TTTGTGCACC GTGGGCTTGA AAGTCTCGTG CGCACCAAGG ACTACAACCA GATGGTCTTT
GTGGTGGAGC GCATCTGCGG CATCTGCTCC TGCATCCACG CCAACTGCTA TTGCAACGCC
CTTGAAAATA TGATGGGCAT CACGGCTCCG CCGCGTGCCC AGTTTCTGCG GGTTATCTGG
TCAGAGCTGC ACCGCATCCA TTCGCATCTT CTCTGGCTCG GCCTTTTTGC CGATGCCTTT
GGCTTCGAAA GCGTGTTCCA GCAGTTCTGG CGTATCCGCG AACATGTTAT GGATATCTGC
GAAGCCACGG CAGGCAACCG CGTTATCCTG TCGGTCAACG TGGTGGGCGG CGTGCGCCGC
GACCTGGCGC CCGACCAGAT ACGCTGGATG CTCGGTCGGC TTGATGAACT GCAAAAGGGC
ATGCGTGAGC TCACAACCAC CATGCTTGAC GACTACACCG TGCAGGAGCG TACGCGCGGC
ATAGGTTATC TCAGTAAAGA CGATGCCCGG CTGCTGGGCG CCGCCGGACC GACCCTGCGC
GGCAGCGGCT GGGAAATCGA CGAGCGTATG CACGGCTATG CCGCCTACAA CGATCTTAAC
TTCATTCCTG TGGTCGAACA CGATGGCGAC TGCTATGCCC GCGCCAAGGT ACGCTTCTAC
GAAGTGCTGC ACGCCATGGA CCTTATCCGC GAAGCGCTGA ACCGCCTGCC GGAAAGCGAA
CTTACGGTGA AAGTTCCCGG CAACCCCGAT GGCGAAGCTG TTTTCCGGGT GGAACAGCCT
AGGGGCGAAC TGTTCTATTA CATACGGGCC AACGGGACCA AGTATCTGGA GCGCATGCGT
GTGCGTACGC CCACCTTTGC CAACGTTCCG CCCCTGCTGC ACATGTTGCC GGGCTGCAAG
TTGCCCGACG TGCCGGTTAT TGTGCTCAGT ATCGACCCGT GCATTTCCTG CACAGAGAGG
TAG
 
Protein sequence
MSNRTTVIPF GPQHPVLPEP LHIKFVVEDE TVVGAIPQLG FVHRGLESLV RTKDYNQMVF 
VVERICGICS CIHANCYCNA LENMMGITAP PRAQFLRVIW SELHRIHSHL LWLGLFADAF
GFESVFQQFW RIREHVMDIC EATAGNRVIL SVNVVGGVRR DLAPDQIRWM LGRLDELQKG
MRELTTTMLD DYTVQERTRG IGYLSKDDAR LLGAAGPTLR GSGWEIDERM HGYAAYNDLN
FIPVVEHDGD CYARAKVRFY EVLHAMDLIR EALNRLPESE LTVKVPGNPD GEAVFRVEQP
RGELFYYIRA NGTKYLERMR VRTPTFANVP PLLHMLPGCK LPDVPVIVLS IDPCISCTER