| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1637 |
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| Symbol | |
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| ID | 7285340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1965501 |
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| End bp | 1969670 |
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| Gene Length | 4170 bp |
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| Protein Length | 1389 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643582450 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_002480214 |
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| Protein GI | 220904902 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.363654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGG ACGATCTTTT CACCGCTCGC GGCACGTCGG CCAACGTGAC CAACATCCGC
AATCTGAAAG CCATCCAGAT TTCCATTGCC TCTCCTGAAG CCATCCGCGA ATGGTCCTAT
GGCGAGGTAA AAAAGCCGGA AACCATCAAC TACCGTACCT TCAAGCCTGA GCGCGACGGC
CTTTTCTGCG CCAAGATCTT CGGCCCCGTG AAGGACTATG AGTGCAACTG CGGCAAGTAC
AAGCGCATGA AGCACCGCGG CATTGTCTGC GAAAAATGCG GAGTTGAAGT CATTGCGTCC
AAGGTGCGTC GCGAGCGCAT GGGGCACATT GAACTGGCCG CGCCCGTAGC CCACATCTGG
TTTTTGAAGA CCCTGCCTTC CAAGATCGGC ACCCTGCTGG ACATGACCAT GGCCGATCTG
GAAAAGGTGC TGTACTTTGA CTCTTACATT GTGCTCGACC CGGGCCAGAC CAACCTGCAG
AAACGCCAGG TCATTTCCGA AGACCAGTAT TTGCAGATTC TGGACCACTA CGGCAGCGAT
GAAGTGCTGA CCGTGGGCAT GGGTGCTGAA GCCGTGCGCA GCCTGCTGGA AGAACTGGAG
CTTGAAAAGC TGCGTACCGA ACTGCGCGAA GAAGGCGAGG CCACCAAAAG CCAGACCAAG
AAGAAAAAGC TTACCAAGCG TCTCAAGATT GTTGAGGCTT TTCTTGAGTC GGACAACAAG
CCCGAATGGA TGATTATGGA AGTTATTCCT GTCATCCCGC CGGAGCTGCG TCCGCTCGTG
CCGCTGGACG GCGGGCGTTT CGCCACCTCC GACCTCAACG ATCTGTACCG CCGCGTCATC
AACCGTAACA ACCGCTTGAA GCGGCTTATG GAGCTTGGCG CGCCGGAAAT CATCATCCGC
AACGAAAAGC GCATGCTGCA GGAAGCGGTG GACGCCCTCT TTGACAACGG CCGCCGCGGC
CGCGCCATTG CAGGAACCAA CGGCCGTCCC CTCAAGTCCC TTTCGGACAT GATCAAGGGC
AAGCAGGGCC GTTTCCGCCA GAACCTGCTG GGCAAGCGCG TGGACTATTC CGGGCGTTCG
GTCATTACCG TCGGCCCTTA CCTCAAGCTG CACCAGTGCG GTCTGCCCAA GAAGATGGCG
CTTGAACTCT TCAAGCCCTT CATCTATTCG GAGCTGGAAA AACGCGGTCA TGCCTCCACT
ATCAAAAGCG CCAAAAAAAT GGTGGAGCGC GAAGAGCTGG TTGTCTGGGA CATCCTGTCA
GAAGTGGTGC GCGAATACCC TATTCTTCTC AACCGCGCCC CGACCCTGCA CCGCCTCGGC
ATTCAGGCTT TCGAACCGCT GTTGGTCGAA GGCAAGGCCA TCCGTCTGCA CCCGCTGGTC
TGCTCCGCAT ACAACGCGGA CTTTGACGGC GACCAGATGG CTGTACATAT TCCCCTGTCT
GTAGAAGCGC AGATCGAATG CCGCGTGCTC ATGATGAGCA CCAACAACAT TCTTTCACCC
GCCAACGGCG GCCCTGTTAT CGTGCCTTCG CAGGATATCG TGCTTGGCCT CTACTATATG
ACGGTGGAAC GCAGCTTTGA AAAGGGCGAG GGCATGAGCT TCTGCGCCCC GTGGGAAGTG
GAAAGCGCCT ATGACGGCGG CATGGTTTCG CTGCACGCAC GCGTCAAGGT GCGCATGCCT
GACGGGCATA CCTACGACAC CACGCCCGGC CGTGTGCTTG TGAGCGACAT TCTCCCGGAA
AAGCTGTCCT TTGACCATGT CAACTGCGTG CTGACCAAGA AGAATATCGC CCGCCTTGTG
GGCGCGGCCT ACGGCCAGTG CGGCATCAAG GCCACGGTCA TTCTTTGCGA CAAGCTCAAG
GATATGGGCT ACGAGTTCGC CACCCGCGCC GGTGTGACCA TCGGCGTCAA GGACCTGACC
ATTCCCGACC GCAAGAAAGA CATTCTTGCC ACGTCCCAGG CCGAAGTGGA CGACATCGAA
CACCAGTATC GTGACGGTAT CATCACCCGT ACTGAAAAGT ACAACAAGGT GGTGGACGTG
TGGACCAAGG CCACGCAGGA CGTTTCCACG GAAATGATCA AGGAAATCTC CTACGATGTG
CTCACTGATC CCAAAACCGG CAAGCAGGAA AAGAACCAGA GTTTCAACCC CATCTTCATG
ATGTCCAACT CCGGCGCGCG AGGCAACCAG GACCAGATGC GCCAGCTTGC GGGCATGCGC
GGCCTTATGG CCAAGCCTTC GGGTGAAATT ATTGAAACGC CCATCACCTC CTCCTTCCGT
GAGGGGCTGT CGGTGTTGCA GTACTTCACC TCCACACACG GCGCGCGTAA AGGTCTGGCG
GACACGGCCC TCAAAACGGC CAACTCCGGT TACCTCACCC GCCGCCTGGT GGACGTGGTG
CAGGATGTCA TCGTGGCCGA ACACGACTGC GGTACGGTGG ACGGCATCGA ACTGACCCAC
CTCAAGGACG GCGGCGATGT CAAAACGCCC CTGTCTGAAC GCATCATCGG CCGCGTACTG
CTCTATCCAG TGCATGATCC CGACGCTCCG GAAGAAATCC TCTTGCCCGA AAACACCATC
ATTTCGGAAA AAGAGGCCCA GATCATCAGC GACAAGGGCA TTTCCTCGGT TACCGTGCGC
TCGCCCCTCA CCTGCCAGGC CGAACGGGGC ATCTGCGCCT TGTGCTACGG GCGTGACCTT
GGCCGCGGGC ACCTGGTCAA TACGGGCGAG ACCGTGGGCA TCATCGCGGC ACAGTCCATC
GGTGAGCCCG GCACGCAGCT GACCATGCGT ACCTTCCACA TCGGCGGTAC GGCATCCAGC
ACCATTGAAA AGAACAAGTT TGAAGCCCTC AACGCGGGTC GCGTCATCCT GAACCGGGTC
AAAGCCGTTA CCAACAAGGA CGGCGTGCAC CTGGTGCTGG GCAAGAGCGG CCAGCTGACC
ATCGTGGACG CTCAGGGCCG CGAACGCGAA AAGTACATTC TGCCCAACGG CGCACGCCTG
CTGGTGCACG ATGGGCAGGA AGTGGTCAAG GGTACGGTCA TGGCCGAATG GGACCCCTTC
AACGAACCTT TTGTGTGCGA AGAAGAAGGT ACCCTGCGCT TTACCGACAT CATTGACGGC
AAGACCGTGC AGGAAAAGGT GGACGACATC ACCCGTCAGG CCAGCCTGAC AATCATGGAA
TACCGCACCA CCAACTTCCG CCCGGCCATC TCCATCTGCG ATGACAACGG TAACGTGAAA
AAGCGCAGCC ACGGCGGCGC AGCGGCCATC TATAGCCTGC CCGTCGGCTC CATCATCATG
GTCAAGGACG GCGAGCATAT CCAGGCTGGC GACATCATCG CCCGTAAACC CCGCGAAACT
GCAAAAACCA AGGACATCGT GGGCGGTCTG CCCCGCGTGG CCGAGCTTTT TGAGGTGCGC
AAGCCCAAAG ACATGGCCGT GGTTTCCGAA ATATCGGGTA CGGTCACCTA TGCGGGCGAA
TCCAAGGGCA AGCGCAAGCT GGTTGTCACG CCTGAAATCG GCGAAGCCAA GGAATACCTG
GTTCCCAAGG GCAAACACAT TACCGCCGCT GACGGCGACT TTGTGGAGGC CGGAGACCCG
TTGACCGAAG GCTACCCCGA ACTGCACGAC ATCCTGCGCA CCAAGGGCGA AAAATACCTG
GCCCGCTATC TGGTGGACGA AATTCAGGAA GTCTACCGCT TCCAGGGCGT GGGCATTGAC
GACAAGCACA TTGAAGTCAT CGTGCGCCAG ATGCTTAAAA AAGTGACCAT TCTGGATACC
GGCGGCACCA GCTTCCTGGT GGGCGAACAG GTGGACAAGG GCGAATTCAA GCATGAAAAC
CAGAAGGCTA TCGCCGAGGG CCGCCAGCCC GCCACGGCGG AACCTCTGGT GCTGGGCATC
ACCCAGGCTT CGCTTACCAC GTCCTCCTTC ATCTCGGCGG CTTCCTTCCA GGAAACTACC
AAGGTTCTCA CCGAGGCCTC CCTCAAGGGC AAGATGGACT ACCTGCGCGG ACTCAAGGAG
AACGTCATCG TGGGCCGCCT CATTCCTGCT GGTACAGGCT ACCGTGAATA CGTCAACGGC
GAGATCATGG TTCCCGACCA GAAGGAACGC CCCGACAAGT TCCTTGAGGA GCTTGAAGAA
AACCCTATTC TGGTTGATCT GAACAGCTAG
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| Protein sequence | MSLDDLFTAR GTSANVTNIR NLKAIQISIA SPEAIREWSY GEVKKPETIN YRTFKPERDG
LFCAKIFGPV KDYECNCGKY KRMKHRGIVC EKCGVEVIAS KVRRERMGHI ELAAPVAHIW
FLKTLPSKIG TLLDMTMADL EKVLYFDSYI VLDPGQTNLQ KRQVISEDQY LQILDHYGSD
EVLTVGMGAE AVRSLLEELE LEKLRTELRE EGEATKSQTK KKKLTKRLKI VEAFLESDNK
PEWMIMEVIP VIPPELRPLV PLDGGRFATS DLNDLYRRVI NRNNRLKRLM ELGAPEIIIR
NEKRMLQEAV DALFDNGRRG RAIAGTNGRP LKSLSDMIKG KQGRFRQNLL GKRVDYSGRS
VITVGPYLKL HQCGLPKKMA LELFKPFIYS ELEKRGHAST IKSAKKMVER EELVVWDILS
EVVREYPILL NRAPTLHRLG IQAFEPLLVE GKAIRLHPLV CSAYNADFDG DQMAVHIPLS
VEAQIECRVL MMSTNNILSP ANGGPVIVPS QDIVLGLYYM TVERSFEKGE GMSFCAPWEV
ESAYDGGMVS LHARVKVRMP DGHTYDTTPG RVLVSDILPE KLSFDHVNCV LTKKNIARLV
GAAYGQCGIK ATVILCDKLK DMGYEFATRA GVTIGVKDLT IPDRKKDILA TSQAEVDDIE
HQYRDGIITR TEKYNKVVDV WTKATQDVST EMIKEISYDV LTDPKTGKQE KNQSFNPIFM
MSNSGARGNQ DQMRQLAGMR GLMAKPSGEI IETPITSSFR EGLSVLQYFT STHGARKGLA
DTALKTANSG YLTRRLVDVV QDVIVAEHDC GTVDGIELTH LKDGGDVKTP LSERIIGRVL
LYPVHDPDAP EEILLPENTI ISEKEAQIIS DKGISSVTVR SPLTCQAERG ICALCYGRDL
GRGHLVNTGE TVGIIAAQSI GEPGTQLTMR TFHIGGTASS TIEKNKFEAL NAGRVILNRV
KAVTNKDGVH LVLGKSGQLT IVDAQGRERE KYILPNGARL LVHDGQEVVK GTVMAEWDPF
NEPFVCEEEG TLRFTDIIDG KTVQEKVDDI TRQASLTIME YRTTNFRPAI SICDDNGNVK
KRSHGGAAAI YSLPVGSIIM VKDGEHIQAG DIIARKPRET AKTKDIVGGL PRVAELFEVR
KPKDMAVVSE ISGTVTYAGE SKGKRKLVVT PEIGEAKEYL VPKGKHITAA DGDFVEAGDP
LTEGYPELHD ILRTKGEKYL ARYLVDEIQE VYRFQGVGID DKHIEVIVRQ MLKKVTILDT
GGTSFLVGEQ VDKGEFKHEN QKAIAEGRQP ATAEPLVLGI TQASLTTSSF ISAASFQETT
KVLTEASLKG KMDYLRGLKE NVIVGRLIPA GTGYREYVNG EIMVPDQKER PDKFLEELEE
NPILVDLNS
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