| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1619 |
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| Symbol | |
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| ID | 7285318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1943836 |
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| End bp | 1944993 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643582428 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002480196 |
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| Protein GI | 220904884 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAC TGGATTACAC CCCCTTTATG CGCGAAGCCA TCGCGCTGGC ACAACAGGGC
CGCTGGAAGA CCTGCCCCAA CCCTATGGTG GGGGCTGTTC TTGTGCGCGA TGGACACATT
GTCGCCAGGG GCTGGCATCG CGCCTTCGGG CTGGACCATG CCGAGGTGGA CTGCCTTAAT
GACGCTGCCG CGCAAGGAGT CGACCCTTCT GAGTGTACGC TGGTTGTCAC GCTTGAACCG
TGCTGCCATC AGGGCAAAAC TCCCCCCTGC ACCGATGCCG TGCTGCGGGC AGGCATAAAA
AAAATCGTGG TGGGGCTGTC CGACCCCAAT CCCGAAGCCT GCGGCGGCGC ATGCCGGCTG
CGCGAATCCG GCCTGGATGT CATTGAGGGC GTCTGCGCAG ATGCCTGCCG TGACCTTGTG
GCAGATTTTC TTGTCTGGCA GCAGGCACAG CGCCCCTACG TGATTCTTAA AATGGCCGCC
ACACTTGATG GGCGTATAGC CACGCGCAAG GGCGAGTCGC AGTGGATCAG TTCGGAAGAA
TCCCGGCAGG AAGTACAGCG CCTCAGGGCC GGCATAGGCC GCTGCGGCGG CGCTGTACTT
GTGGGCGGGG GCACGTTCAG GGCTGACGAT CCGCGGCTTA CCGTGCGGCC CATCAATGAT
GGCGAGCCTC TCGGCCCGCA GCCCCTGGCC TGCGTGCTCA CCTCACGCCT GCCCCAGCCG
GATGCCGATT TTTACCTGCT CAAAGAGCGG CCCCAGCAGA CCGTATTTCT GGCCTCGCCT
GCTGCGGCGG CCTCCACCAC AGCCAAGGCC CTGCGCGACA TGGGAGTGCG CGTTCTTTCA
CTGGGGCCGA GCCTGCGCGG CGGGCCGGAC CTGACCCATA TGCTGCGCAC AATGCGTGAA
GAGCTGGATT GCCCCTATCT GCTGTGCGAA GGCGGCGGGC ATCTGGCCCT CAGCCTTCTT
GAGGCTGGCG TTGTGGACGA ATTCCGCCTG CATATGGCCC CGATGATTCT GGGAGACGCG
GACGCGCAAC CGCTTTTTTC CGGCCGTGCC CCCCTCAGCC TGGACGAAGC CCTGCGCATG
CGCGTGACAG GCAGCCACAT CAGCGGGGGC GACATCCATA TTGAGCTGCG CCCGCTGCAA
GCCGTGGAAG AAAAGTAG
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| Protein sequence | MSELDYTPFM REAIALAQQG RWKTCPNPMV GAVLVRDGHI VARGWHRAFG LDHAEVDCLN
DAAAQGVDPS ECTLVVTLEP CCHQGKTPPC TDAVLRAGIK KIVVGLSDPN PEACGGACRL
RESGLDVIEG VCADACRDLV ADFLVWQQAQ RPYVILKMAA TLDGRIATRK GESQWISSEE
SRQEVQRLRA GIGRCGGAVL VGGGTFRADD PRLTVRPIND GEPLGPQPLA CVLTSRLPQP
DADFYLLKER PQQTVFLASP AAAASTTAKA LRDMGVRVLS LGPSLRGGPD LTHMLRTMRE
ELDCPYLLCE GGGHLALSLL EAGVVDEFRL HMAPMILGDA DAQPLFSGRA PLSLDEALRM
RVTGSHISGG DIHIELRPLQ AVEEK
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